Gene RoseRS_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2967 
Symbol 
ID5209935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3713571 
End bp3714866 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content59% 
IMG OID640596559 
Productglycoside hydrolase family protein 
Protein accessionYP_001277281 
Protein GI148657076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTC AGTACGATAT CGGTCTTTTC GTTCATTCCC GTCCTCATAC GCGGCTTCCT 
GAACCGCTTC GTTTTCCGCC AGGCTTCCTG TGGGGAACCG CAACCAGCGC ACATCAGGTC
GAAGGGCAGA ATACCAACAA TCAGTGGTGG GTCTGGGAGC AGCAGGGGCG CTGCTGGCAT
GGCGATGTTT CCGGTGATGC CTGCGACTGG TGGCGCGATG CCGAGGGCGA CCTGGATCGT
GCGGCAGCGC TTGGTACGAA TGCCCATCGT ATGTCGATCG AATGGAGCCG TATCGAACCG
GAAGAGGGGC GTTTCGATCG TGAGGCAATT CGTCGCTACC GCGAGATCAT TGGTGGAATC
GTCAGGCGCG GAATGACGCC GATGATTACG CTGCACCACT TCACCAATCC GCTCTGGGTC
GAGGCAAAGG GCGCCTGGTT GAACCCGGCG ACTCCAAAGC GATTTGCGCA ATTCGTCGCA
TACGCAGTCG AAGAACTGGG CGATCTCTGC AATCTCTGGT GCACCGTCAA TGAGCCGACG
GTCTACGCTG CGTTGAGTTA TCTGCAGGGC GTGTGGCCCC CCGGACGACG TAACATCTTG
CAGGCGCTGC GGGTCTTCGG CAATCTGATG CGTGGGCATG AACTTGCAGC GCAGACGGTT
CACAGGCAGC ATCCGGCGCA TCGTGTCGGT ATCGTGCACC ATAAACGGAT TCTCGATCCG
GCATCGCCTG CTGGTCACGA TGTGCTCACG ACGGTCATGT ACGACTATCT GGTCAACGGA
CTGGTGCTGC GCCGTCTGCG CGAGACGTCC GACTTTTTTG GATTGAACTA CTACAGTCGT
GATCACATCG CCTTCGATCT GCGACGGCCG TACCATCTGT TCATTCGTCG CTTCACACCT
CCATATGTGG AACAGAGCGA TGCCGGTATG CTTGGCACAT TCGGCGAGAT CTATCCCAAT
GGTCTGTACC GTGCGCTCAA ACGAGCCTAT CGCTGGCTGA AGCTCCCCAT CTACGTGACC
GAGACCGGTC TGCCGGACGA GGACGACAAT CAGCGTCCGC GGTTTTTGCT CAACCATCTC
GAGTCGGTCT ATCGAGCGAT CCAGGAAGGG ATCGATGTCC GCGGAGTGTT CATCTGGTCG
CTGGTGGACA ACTTCGAGTG GGCGGAGGGA TGGGGGCTGC GCTTCGGGTT GTATGCGCTC
GATGAGCGAA CTGGCGAACG GCGGATGCGC CCGTCGGCGG CGCTCTACGC CATTATCGCG
CGCGCGAATG CGATCCCTGC GCCTGGTGCG CTCTGA
 
Protein sequence
MTSQYDIGLF VHSRPHTRLP EPLRFPPGFL WGTATSAHQV EGQNTNNQWW VWEQQGRCWH 
GDVSGDACDW WRDAEGDLDR AAALGTNAHR MSIEWSRIEP EEGRFDREAI RRYREIIGGI
VRRGMTPMIT LHHFTNPLWV EAKGAWLNPA TPKRFAQFVA YAVEELGDLC NLWCTVNEPT
VYAALSYLQG VWPPGRRNIL QALRVFGNLM RGHELAAQTV HRQHPAHRVG IVHHKRILDP
ASPAGHDVLT TVMYDYLVNG LVLRRLRETS DFFGLNYYSR DHIAFDLRRP YHLFIRRFTP
PYVEQSDAGM LGTFGEIYPN GLYRALKRAY RWLKLPIYVT ETGLPDEDDN QRPRFLLNHL
ESVYRAIQEG IDVRGVFIWS LVDNFEWAEG WGLRFGLYAL DERTGERRMR PSAALYAIIA
RANAIPAPGA L