Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2967 |
Symbol | |
ID | 5209935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3713571 |
End bp | 3714866 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596559 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001277281 |
Protein GI | 148657076 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTC AGTACGATAT CGGTCTTTTC GTTCATTCCC GTCCTCATAC GCGGCTTCCT GAACCGCTTC GTTTTCCGCC AGGCTTCCTG TGGGGAACCG CAACCAGCGC ACATCAGGTC GAAGGGCAGA ATACCAACAA TCAGTGGTGG GTCTGGGAGC AGCAGGGGCG CTGCTGGCAT GGCGATGTTT CCGGTGATGC CTGCGACTGG TGGCGCGATG CCGAGGGCGA CCTGGATCGT GCGGCAGCGC TTGGTACGAA TGCCCATCGT ATGTCGATCG AATGGAGCCG TATCGAACCG GAAGAGGGGC GTTTCGATCG TGAGGCAATT CGTCGCTACC GCGAGATCAT TGGTGGAATC GTCAGGCGCG GAATGACGCC GATGATTACG CTGCACCACT TCACCAATCC GCTCTGGGTC GAGGCAAAGG GCGCCTGGTT GAACCCGGCG ACTCCAAAGC GATTTGCGCA ATTCGTCGCA TACGCAGTCG AAGAACTGGG CGATCTCTGC AATCTCTGGT GCACCGTCAA TGAGCCGACG GTCTACGCTG CGTTGAGTTA TCTGCAGGGC GTGTGGCCCC CCGGACGACG TAACATCTTG CAGGCGCTGC GGGTCTTCGG CAATCTGATG CGTGGGCATG AACTTGCAGC GCAGACGGTT CACAGGCAGC ATCCGGCGCA TCGTGTCGGT ATCGTGCACC ATAAACGGAT TCTCGATCCG GCATCGCCTG CTGGTCACGA TGTGCTCACG ACGGTCATGT ACGACTATCT GGTCAACGGA CTGGTGCTGC GCCGTCTGCG CGAGACGTCC GACTTTTTTG GATTGAACTA CTACAGTCGT GATCACATCG CCTTCGATCT GCGACGGCCG TACCATCTGT TCATTCGTCG CTTCACACCT CCATATGTGG AACAGAGCGA TGCCGGTATG CTTGGCACAT TCGGCGAGAT CTATCCCAAT GGTCTGTACC GTGCGCTCAA ACGAGCCTAT CGCTGGCTGA AGCTCCCCAT CTACGTGACC GAGACCGGTC TGCCGGACGA GGACGACAAT CAGCGTCCGC GGTTTTTGCT CAACCATCTC GAGTCGGTCT ATCGAGCGAT CCAGGAAGGG ATCGATGTCC GCGGAGTGTT CATCTGGTCG CTGGTGGACA ACTTCGAGTG GGCGGAGGGA TGGGGGCTGC GCTTCGGGTT GTATGCGCTC GATGAGCGAA CTGGCGAACG GCGGATGCGC CCGTCGGCGG CGCTCTACGC CATTATCGCG CGCGCGAATG CGATCCCTGC GCCTGGTGCG CTCTGA
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Protein sequence | MTSQYDIGLF VHSRPHTRLP EPLRFPPGFL WGTATSAHQV EGQNTNNQWW VWEQQGRCWH GDVSGDACDW WRDAEGDLDR AAALGTNAHR MSIEWSRIEP EEGRFDREAI RRYREIIGGI VRRGMTPMIT LHHFTNPLWV EAKGAWLNPA TPKRFAQFVA YAVEELGDLC NLWCTVNEPT VYAALSYLQG VWPPGRRNIL QALRVFGNLM RGHELAAQTV HRQHPAHRVG IVHHKRILDP ASPAGHDVLT TVMYDYLVNG LVLRRLRETS DFFGLNYYSR DHIAFDLRRP YHLFIRRFTP PYVEQSDAGM LGTFGEIYPN GLYRALKRAY RWLKLPIYVT ETGLPDEDDN QRPRFLLNHL ESVYRAIQEG IDVRGVFIWS LVDNFEWAEG WGLRFGLYAL DERTGERRMR PSAALYAIIA RANAIPAPGA L
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