Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2163 |
Symbol | |
ID | 5209125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2663652 |
End bp | 2664161 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640595764 |
Product | PHA accumulation regulator DNA-binding protein |
Protein accession | YP_001276493 |
Protein GI | 148656288 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.520708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCA TCAAAAAGTA CGCCAATCGC AAACTGTACC ACATCGATCG CAAACAGTAC ATTACCCTCG AAGGCATTGC TGCACTGGTT CAGGCAGGCG AGCAGGTACG GGTGGTGGAC AATGAAACCG GTGAAGATAT TACTGCACAG ATCCTGGCGC AGGTTGCACT CCAGACACGC GGCGATCAGG GGCGATTGCC AACCTCGTTG CTGACCAGCC TGATCCGCGC TGGCGAAGGG ACGTTGAGCG GGCTGCAACG CTCGCTCCTG GGGGTATTTG GAGGCGCCGG ATTCGTCAAT GCCGAGATCG AACGCCGTCT GGCGCATCTC CGCGATACGG GCAAACTCAA CGATCAAGAG GTTCAGCGAT TACGCACGTT GCTGGTGGAC GAGTACCAGT CAACAACGGC GCCCGATCTC CCCAGCAAGA GCGACATTGA TCGGCTTCAC GAACAGGTCG ATGAACTGAC CCGACTCGTT GAGCAACTCC TGGCACAACG GAAGCAGTAA
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Protein sequence | MQTIKKYANR KLYHIDRKQY ITLEGIAALV QAGEQVRVVD NETGEDITAQ ILAQVALQTR GDQGRLPTSL LTSLIRAGEG TLSGLQRSLL GVFGGAGFVN AEIERRLAHL RDTGKLNDQE VQRLRTLLVD EYQSTTAPDL PSKSDIDRLH EQVDELTRLV EQLLAQRKQ
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