Gene RoseRS_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2163 
Symbol 
ID5209125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2663652 
End bp2664161 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content57% 
IMG OID640595764 
ProductPHA accumulation regulator DNA-binding protein 
Protein accessionYP_001276493 
Protein GI148656288 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.520708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA TCAAAAAGTA CGCCAATCGC AAACTGTACC ACATCGATCG CAAACAGTAC 
ATTACCCTCG AAGGCATTGC TGCACTGGTT CAGGCAGGCG AGCAGGTACG GGTGGTGGAC
AATGAAACCG GTGAAGATAT TACTGCACAG ATCCTGGCGC AGGTTGCACT CCAGACACGC
GGCGATCAGG GGCGATTGCC AACCTCGTTG CTGACCAGCC TGATCCGCGC TGGCGAAGGG
ACGTTGAGCG GGCTGCAACG CTCGCTCCTG GGGGTATTTG GAGGCGCCGG ATTCGTCAAT
GCCGAGATCG AACGCCGTCT GGCGCATCTC CGCGATACGG GCAAACTCAA CGATCAAGAG
GTTCAGCGAT TACGCACGTT GCTGGTGGAC GAGTACCAGT CAACAACGGC GCCCGATCTC
CCCAGCAAGA GCGACATTGA TCGGCTTCAC GAACAGGTCG ATGAACTGAC CCGACTCGTT
GAGCAACTCC TGGCACAACG GAAGCAGTAA
 
Protein sequence
MQTIKKYANR KLYHIDRKQY ITLEGIAALV QAGEQVRVVD NETGEDITAQ ILAQVALQTR 
GDQGRLPTSL LTSLIRAGEG TLSGLQRSLL GVFGGAGFVN AEIERRLAHL RDTGKLNDQE
VQRLRTLLVD EYQSTTAPDL PSKSDIDRLH EQVDELTRLV EQLLAQRKQ