Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1927 |
Symbol | thiE |
ID | 5208888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2391398 |
End bp | 2392108 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595536 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_001276266 |
Protein GI | 148656061 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0119683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTGT CCACCCTGAT CGAACCACTC CCGTCGGTCC AGTCTGATCC GATACCGTTT CCATCTGGAG GAGGTATTGT CTACGTCATT ACCGACCGGC GCGCAGCTGG AGAGCGTGCG CTGACGGATA TTGTGAGTGC AGCGTTGCGT GGTGGCGCGC ATGTGATTCA ACTCCGCGAC AAGGACGTGC CGGCGCGCGA CATGGTTGCA CTGGGGCAGG CGTTACTTCC GCTCACCCGC GATGCCGGAG TCCCGCTCAT CGTCAACGAC CGTGTCGATG TCGCGCTGGC GCTCGATGCC GATGGCGTCC ATGTCGGTCA GGACGATATT CCGGCGGAAA TGGTGCGGCG GATCATCGGT CCGGAACGCA TTCTCGGCGT ATCGGTCGCA ACGGTCGAGC AGGCGCAGCG CGCGATGGAC GCTGGCGCGA CGTATGTCAG TGTCGGCGAT CTTTTCGGGA CGCCGAGTAA ACCGGATGCG GGACCACCCA TCGGGCTGGA ACCGCTGGCG GAGATTGCCC GCACGGTCAA CCTGCCGGTG CTGGGCATCG GCGGCATCAA CCTCGCAAAT GCCGCTTCGG TTATTCGGGC AGGCGCTGTT GGCGTGGCGG TCATCTCGGC GGTGATCGGC GCGCCAGACC CTGAAGCAGC AACGCGGGCA CTCCATGCCG TCATTGCGTC AGCGCTCGAT GAACGTGCAC GCGCCGGGTA G
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Protein sequence | MVLSTLIEPL PSVQSDPIPF PSGGGIVYVI TDRRAAGERA LTDIVSAALR GGAHVIQLRD KDVPARDMVA LGQALLPLTR DAGVPLIVND RVDVALALDA DGVHVGQDDI PAEMVRRIIG PERILGVSVA TVEQAQRAMD AGATYVSVGD LFGTPSKPDA GPPIGLEPLA EIARTVNLPV LGIGGINLAN AASVIRAGAV GVAVISAVIG APDPEAATRA LHAVIASALD ERARAG
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