Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0494 |
Symbol | |
ID | 5207431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 625985 |
End bp | 627820 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594114 |
Product | ABC transporter related |
Protein accession | YP_001274868 |
Protein GI | 148654663 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCG CACAGTTCGA TGATGATGAA ATCCTTGGAA AGGCATACGA CGCGACCCTG GTGCGTCGTC TGGGTGTCTT TGTCGCGCCG TACTGGCGTC GACTCGCACT GGCGACGGCG CTGATGTTCG GTGGCGCAGC GGTGGAACTC GCTCCGCCAT TCCTGGTCAA ACAGGCAATC GACGGTCCCA TCGCGGCGCG CGACCCATCC GGCGTGTTGC CGATCTTCGG GGTGTACATC GTGGCGCTGC TGACTGCATT CGGCTTCCGC TACGGTCAGA CCTATATTGT CCAATCGGTC GGGCAGCAGG TGATGGTCGA CATCCGTACC CGTATTTTCA GCCACATCCA GCGTATGAGC CTGGCATTCT TCGACCGTAA CCCGGTCGGA CGATTGATCA CCCGCCTGAC GAACGATGTC GATGCGCTGA ACGAGTTTAT CACGCAGGGA ACGGTGGCGC TGCTTGGTGA TCTGGTGCGC TTGCTGTTCA TCGTGATCAC CATGCTGCTG CTGAACTGGC GGCTGGCGCT GATCAGTTTC ATCATGTTTC CAGCGGTGAT GCTGGCGTCC AGTGTGTTTC AACGCATCAT GCGAACCATC TACCGGCGCG TCCGGCAACG TATTGCGCGG ATCAATGCCT TTCTGAACGA ACAGATCAGT GGGGTGCTGA TCACGCAACT GTTCAACCGC GAGGAACAGA GTCGCATTCG TTTTGCGGAA CTGAGCCGTG ATTACCTGGC GGCGCAGTTG CAGTCGAACC GAACCTTCGC GGTCTTTTTC CCACTCATTA ATTTCCTCTC GGTGACGGCA ATGGCGCTGC TCCTCTACTT TGGCGGGCAG GCGGTGCTGG CAGACGTGGC GACGCTCGGT ATGCTGGTTG CGTTCATTCA GTATACCGAC CAGGCATTCC AGCCGATCCG CCAGATCGCT GAACGCTACA ATACATTCCA GTCGGCGATG GCATCGGCGG AACGGATATT CCGGGTGCTC GACACGCCTG CAACAGTCGT TGATCCAGAG CATCCGCGCG CATTGCCGAC ACCGGTGCGC GGTGAGATCG CATTTAAGGA TGTATGGTTC ACTTACGACA CCGATGCTGC CGGACCCGAT GGATTCGGGT TGACGGATAC CGATGACCGC TGGGTGCTGC GCGGCATCTC GTTCACCATC CCGGCAGGAC AGGCAGTGGC TGTGGTGGGG GCGACCGGCG CGGGCAAAAC ATCGCTCGTC AGCCTGATGG CGCGCTTTTA TGACATTCAG CGCGGTTCGA TCACACTTGA CGGGATCGAT ATCCGCGACC TGCGCCAGAC CGACCTGCGC CGGCACGTCA GCGCGGTACC ACAAGACCCG GTGTGTTTCA GCGGTTCCAT CGCCTCGAAT ATCCGCCTGC ACGACGAGAG CATCAGTGAT GAACAGGTTC GCCGCGCTGC GGAGATTGCG TGCGCAGCGC CGTTTATAGA GCGGTTGCCG GGTGGCTATG ATTACGAAGT GCGTGAACGC GGCAGCAATC TGTCGGTTGG ACAGCGACAG TTACTGGCGT TTGCCCGCGC AATTGCGTTC AACCCCGAAG TGCTGCTCAT TCTCGACGAA GCCACATCGA GCGTCGATAC CGAAACGGAA GGGTTGATCC AGGAAGCGTT GGAGCGTATG ATCAAGGGGC GAACCAGCAT CGTCATTGCG CATCGCCTCT CGACGATCCG CCACGTGGAC CGGATTCTGG TGCTGCACAA GGGGCGCCTG GCAGAAGATG GCTCGCACGA CGAACTGCTG GCGAAGCGCG GTTATTACTA CCGTCTGTAT CAGCTCCAGT TCGCGGGGGA ACTGAAAAAG AATTAA
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Protein sequence | MAGAQFDDDE ILGKAYDATL VRRLGVFVAP YWRRLALATA LMFGGAAVEL APPFLVKQAI DGPIAARDPS GVLPIFGVYI VALLTAFGFR YGQTYIVQSV GQQVMVDIRT RIFSHIQRMS LAFFDRNPVG RLITRLTNDV DALNEFITQG TVALLGDLVR LLFIVITMLL LNWRLALISF IMFPAVMLAS SVFQRIMRTI YRRVRQRIAR INAFLNEQIS GVLITQLFNR EEQSRIRFAE LSRDYLAAQL QSNRTFAVFF PLINFLSVTA MALLLYFGGQ AVLADVATLG MLVAFIQYTD QAFQPIRQIA ERYNTFQSAM ASAERIFRVL DTPATVVDPE HPRALPTPVR GEIAFKDVWF TYDTDAAGPD GFGLTDTDDR WVLRGISFTI PAGQAVAVVG ATGAGKTSLV SLMARFYDIQ RGSITLDGID IRDLRQTDLR RHVSAVPQDP VCFSGSIASN IRLHDESISD EQVRRAAEIA CAAPFIERLP GGYDYEVRER GSNLSVGQRQ LLAFARAIAF NPEVLLILDE ATSSVDTETE GLIQEALERM IKGRTSIVIA HRLSTIRHVD RILVLHKGRL AEDGSHDELL AKRGYYYRLY QLQFAGELKK N
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