| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0288 |
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| Symbol | |
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| ID | 5207223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 367805 |
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| End bp | 369760 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640593914 |
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| Product | DNA primase |
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| Protein accession | YP_001274670 |
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| Protein GI | 148654465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.375271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0229545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGT CTGGCATCAC CGATCAGATC AAAGAAAAGA TCGATATTGT CGAGTTTATC
TCGGCGTATG TGCCGTTGCG GAAGATGGGG CGGAGTTATG TCGGTTTTTG TCCCTTCCAC
CCGAACACGC GCACGCCTGC ATTCCACGTA TTTCCTGATA CGCAGAGTTT TCACTGTTTC
GGATGCAAGG CGTCGGGATC GGTGTTCGAC TTTCTGATGC GTCGTGAGGG TGTGGAGTTC
CGTGAAGCGC TCGAGCGTCT CGCGCAGCGG GCGGGGGTGC AGTTGCAGCC GCGCACCGAA
GATGAAGAGC AGCAGGACCG GCTGCGCACG CGCCTGCTCG AGGCGAATGC CGCTGCCGCT
GCATTCTTCC GCCATATGCT GGTGAAATCG CAGCGTGGTG AAGCCGCGCG CGCCTATGTT
GCCAGCCGAC GGATCGACGA TGCCACCGGC GAAGCGTTCC TGCTCGGGTA CGCCCCCGAC
GACTGGGAGT TGCTCCTCGG ATACCTGACC GGGCGACGCG GCTTTTCGCC GGAAGAAGTC
GAAGCGGCCG GTCTGGCGAT CCATCACGAA ACACGCGGGT ACTACGACCG GTTTCGCAAC
CGGTTGATGT TTCCGATCCG CAATGCGCGC GGCGAGATTG TCGGGTTCGG CGGCAGGGCG
CTGGGTGATG CCCAACCAAA GTACATGAAC TCGCCACAAA CGCCGCTGTT CGATAAAGGA
AAGGTGTTAT ACGGGCTTGA CCTGGCGCGC GATGCGATCC GTCATGCCGA TGCAACCGTG
ATCGTCGAAG GGTACATTGA TGTCATCATT GCCCACCAGC ATGGTTTTCG CAATGTCGTT
GCACCGCTTG GCACGGCGCT AACCGCTGAT CATGTGGCAC AGGTGAAGAA ACTGGCGCGC
ACGGTGTATC TGGCGCTCGA TGCAGACGCC GCTGGCGTGC GCGCAACGCT GAAAGGGCTT
CAGACATTGC AGAGTCAGCC CGAAGGCGAA CTGATCGCTA TCACCTCGCC GCACGGCGTG
ATCGGGCTAC AACGCCAGCA GGATGTCGAG ATCAGGATCC TGACCCTTCC TGAAGGGAAA
GACCCGGACG AAGTCATTCA GGAAGACCCG GACCGGTGGC GTGCTGCGCT GGCAGCTGCG
CGCCCGGCGA TGGATTTCTA CATTGAAGCA TTGACGTCCG ACCTCGACCT GTCGAGCGGA
CGAGGCAAGG CTGAGGCGGT CGAACGTGTC GCTCCGCTGC TCAACCAGAT TGCCAGTCCG
GTCGAGCAGG CGCACTACGT CCAGGTGCTG GCGCGACTGA TCGATGTCGA AGAGCGGTAT
ATACTTGCAG CGTTGGGTGG AAAAGCGCAC CCGGAAGATC GTCATCGTCC GGCGGATCAA
CCGCGTGCGA CCAGGACAGC AGAGCAGTCG CCGCCTGACG GAGCCAGGTC ATCCGCACCC
ACCCCAACCC AGGAAGAATA CCTGTTGGGA TGGGTCATTC GCTTCCCGGC AGCGCGGGCA
GCGGTCGAAG AAAAACTCCA CCGCGACCTG TCGCCCTATC CGGCGCTCCA ATCGCTGTTG
AGCGGCACGA TTGACGAGTT GTTCGCGCGC GACGAGTGCC GGGCGTTGTG GCGCGCCTGG
ATCGCAGCGC CTGGCGGAAG CGACCCGGAG ACATGGGCGC AGACGCTCAG CGCGCCGTTG
AACGATGTCG CGCAGCGGGT GCTGGGATTG CACGCACCGC AACCTCAGGA GTACCGGATT
GTTAACGACG CACTGGAATG TGCTACAATC CTTCAGCGCG ACGTCGCAAA ACGCTGGCTT
GCGCAGATTG CGCGCATGCA GGCTGAGGCG ACGGGAGAAA CAGATCAGGA GATGCTGCTC
GAACAACTGG TGCAGGTCAA ACAGTTCATC AACATGCTGA GCATCCCGCG TCGCAGTGCA
GCATATACCG ACCTGCACGC CCTGCATACG CTGTAG
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| Protein sequence | MSMSGITDQI KEKIDIVEFI SAYVPLRKMG RSYVGFCPFH PNTRTPAFHV FPDTQSFHCF
GCKASGSVFD FLMRREGVEF REALERLAQR AGVQLQPRTE DEEQQDRLRT RLLEANAAAA
AFFRHMLVKS QRGEAARAYV ASRRIDDATG EAFLLGYAPD DWELLLGYLT GRRGFSPEEV
EAAGLAIHHE TRGYYDRFRN RLMFPIRNAR GEIVGFGGRA LGDAQPKYMN SPQTPLFDKG
KVLYGLDLAR DAIRHADATV IVEGYIDVII AHQHGFRNVV APLGTALTAD HVAQVKKLAR
TVYLALDADA AGVRATLKGL QTLQSQPEGE LIAITSPHGV IGLQRQQDVE IRILTLPEGK
DPDEVIQEDP DRWRAALAAA RPAMDFYIEA LTSDLDLSSG RGKAEAVERV APLLNQIASP
VEQAHYVQVL ARLIDVEERY ILAALGGKAH PEDRHRPADQ PRATRTAEQS PPDGARSSAP
TPTQEEYLLG WVIRFPAARA AVEEKLHRDL SPYPALQSLL SGTIDELFAR DECRALWRAW
IAAPGGSDPE TWAQTLSAPL NDVAQRVLGL HAPQPQEYRI VNDALECATI LQRDVAKRWL
AQIARMQAEA TGETDQEMLL EQLVQVKQFI NMLSIPRRSA AYTDLHALHT L
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