| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0781 |
|---|
| Symbol | |
|---|
| ID | 4037572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 857513 |
|---|
| End bp | 858283 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637976157 |
|---|
| Product | Iojap-related protein |
|---|
| Protein accession | YP_582936 |
|---|
| Protein GI | 94309726 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
|---|
| TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.11902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.247773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA ACAAGAAAGA CACCATGGAT ATTCGTAAAC TGCAGCGCGC GATCGTCGAC
GGGCTCGAGG ATGTGAAGGC GCAGGACATC AAGGTGTTCG ACACCACTCA CCTGACCGAA
CTGTTCGACC GGGTGGTGAT CGCCAGCGGT AATTCGAACC GTCAGACCAA GGCGCTGGCG
GCGTCGGTAC GGGATACGGT CAAGGATGCC GGCGGCCACA TCGTGGCGGT CGAGGGCCTG
GAGACCGGCG AGTGGGTGCT GGTGGACTGC GGCGATGCCG TGGTGCACAT CCTGCAGCCG
CAACTGCGCC TGTACTACAA CCTGGAAGAG ATCTGGGGCG ACAAGCCGGT GCGCGTGAAG
CTGGCTGCTG GCAAGGGCCT GGCCAAGGCC AGCGAGCCGA TGGACGACGA GGATGCCGAG
CCGGCCCCGC GCGTGCGTCG CGCATCGAAC CTGCGCCCGG CGCTGGCCCG TTTGCCGGAA
GGCATGAAGG AGCCGTCGCC GCCGATGGGT CACGAGGACA CCGATCCGGA CGCGATCGCC
ACGATCCGCA AGCCGGCGCG CAAGACCAGC AGCACGGGCA CCGCAGCCAA GGCACCGGCA
CGCAAGACCA CGACGGCTCG CAAGACGACG ACCGGCACGG CCGCCAAGAC GCCGGCCCGC
AAGTCGGCAA CAGGCACCGC CACGAAAACG ACGGCTCGCA AGACCACCGC GACCAAGACG
GCTGCTGCCA AGACCGCCGC ACCGCGCAAG CGCGCAACGC GTTCGGCCTG A
|
|---|
| Protein sequence | MKLNKKDTMD IRKLQRAIVD GLEDVKAQDI KVFDTTHLTE LFDRVVIASG NSNRQTKALA
ASVRDTVKDA GGHIVAVEGL ETGEWVLVDC GDAVVHILQP QLRLYYNLEE IWGDKPVRVK
LAAGKGLAKA SEPMDDEDAE PAPRVRRASN LRPALARLPE GMKEPSPPMG HEDTDPDAIA
TIRKPARKTS STGTAAKAPA RKTTTARKTT TGTAAKTPAR KSATGTATKT TARKTTATKT
AAAKTAAPRK RATRSA
|
|---|
| |