Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4948 |
Symbol | |
ID | 8007541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 329311 |
End bp | 329982 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644821865 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_002973125 |
Protein GI | 241113290 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCT CAAAAAAACC GGAATTATTG ATCTTCGACT GCGACGGGGT CCTCGTCGAT AGCGAGCTTA TCGCAACCGC GGTGCACATC GAAGCGTTGG CGAAGTGTGG CTATATCATA TCCGCTGAAG AGTATAATGA TCGTTTCGTG GGAATGACTG ACCAGCAGAG TTATTCAGTC ATAGAATCCG AGCGGGGCCT CCGCCTACCA GAGGATCACC ATGAAAGCGT TATGGCCGAA ATCGCAAATC GTTACGCGCG TGATCTGCGC GCGACCAGCG GCGTTCGGCA AGCGTTGCAA GCTATCAATT TGAAGAAGTG CGTCGCGTCG AACAGTGACA CTACAAAGCT CTGCTTGGCA CTCATAGTCA CAGACCTACA CAAGTTTTTT TGGCCCCATG TCTTCAGCGC TTCGCAAGTT GCTCGTGGGA AGCCGGCTCC GGATCTCTTT TTGTTTGCTG CACAGAATAT GAAGAAACCA GCTGGCAGTT GTCTTGTTAT TGAAGATAGT GTTGCGGGAA CCCAGGCGGC GGTGGCTGCG GGGATGACGG TGATTGGCTT TGTTGGTGGC TCCCATTGCC TACCTGGGCA TGGAGAAAAA CTGGCAGAAG CAGGTGCGAT AAAGCTGTTT AATGACATGG CGGCACTGCC ACAAATCTTG GCTCGTTTGT GA
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Protein sequence | MSFSKKPELL IFDCDGVLVD SELIATAVHI EALAKCGYII SAEEYNDRFV GMTDQQSYSV IESERGLRLP EDHHESVMAE IANRYARDLR ATSGVRQALQ AINLKKCVAS NSDTTKLCLA LIVTDLHKFF WPHVFSASQV ARGKPAPDLF LFAAQNMKKP AGSCLVIEDS VAGTQAAVAA GMTVIGFVGG SHCLPGHGEK LAEAGAIKLF NDMAALPQIL ARL
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