Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0064 |
Symbol | |
ID | 8011310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 62320 |
End bp | 63879 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822654 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_002973914 |
Protein GI | 241202818 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGT CCGCCAATCT TTTCCTGCGC CAGACTCAGT CTTTGGTGAT GACGCCGCAA CTGATGCAAT CCATCCAGTT GCTGCAGATG ACGCATTTCG AACTCAACCA GTTCATCGCC CTGGAAGTGG AGAAGAACCC GCTGCTCGAA TTTCCGTCGA ATGACGGCGA GGCGGGCGGC GAACGCGGCG AAGCCGAAGA TGGAGAGTAT GCTCATCAGC CGGAGGATGC CGGGTCGGAC GACGGTTACG ATAACCGCAC CGAGGCGCTC TCCAGCGACT GGTATGACAA TGGCGGCAGC GCCAGCACCA GCCGGCTGAA CGACGAGCTC GACGCCAATT ACACCAATGT CTTTCCTGAC GACGGTGCCC CGCAGCGCCT CGATGCGCCG GAGCTCGTCA GCCAGTGGAA GTCGATGCCG GGCAGCGGCG AGGGCGCCGA CTACGATCTC GACGATTTCG TCGCCGGCCA GGTGTCGCTG CGCGATCATC TCGCCCAGCA GATCCCCTTC GTCCTGCCCG ACATGGCCGA CCGGCTGATC GCGCAGAATT TCGTCGACCA GCTCGACGAC TGCGGTTATC TGCAGGCCGA TATCGTCGAG GCGGGCGAGA GGCTGGGCAC GAGCCTCGCA CAGGCAGAGC GCGTGCTCGC CACCCTCCAG AGCCTCGATC CGCCGGGTGT TTTCGCCCGC AGCCTCGCCG AATGCCTGGC GATCCAGCTG AAGCAGAAGG ACCGATATGA CCCGGCCATG CAGGCTCTGG TCGAAAATCT CGAACTGCTT GCCCGGCGCG ATTTTGCCAC GCTGAAGCGG CTTTGCGGCG TCGACGAGGA AGATCTTCTC GACATGCTCG GCGAGATCCG CCAGCTCAAT CCGAAGCCCG GCAGCGGTTT CGAGGCGGGT ATTTCCGAAG CGATCATGCC CGATGTGGTC GTCAGAGCCT CCTCGGATGG CGGCTGGCTG GTCGAGCTCA ATCCGGATAC GCTGCCGCGA GTGCTGGTCA ACCAGTCTTA TTTTTCCCGG GTGACAAAGA ACGGCGAGGA TCACGCCTTC CTCTCCGATT GCCTGCAGAC CGCCAACTGG CTGACGCGCA GCCTCGATCA GCGGGCTAAA ACCATCATGA AGGTGGCAAG CGAAATCGTC CGCCAGCAGG ACGCCTTCCT GCTGCACGGC GTCGACTATC TGCGCCCGCT GAACCTGAAG ACGGTCGCCG AAGCGATCAA GATGCATGAA TCCACCGTCA GCCGGGTCAC GTCGAACAAA TATATGCTGA CGCCGCGCGG CCTCTTCGAA CTCAAATATT TCTTCACCGT CTCGATCAGC GCCGTCGCAG GCGGCGACAG CCATTCGGCC GAAGCCGTGC GTCACAAGAT CCGCGCGCTG ATCCTGCAGG AGAGCCCGGA GGCGGTGCTT TCCGACGACG ATATCGTCGA CATGCTGAAG AAGGGCGGGG TCGATCTCGC CCGCCGCACG GTTGCGAAAT ACAGGGAGGC GATGAACATT GCCTCTTCGG TCCAGCGCCG CCGCGAGAAG CGGGCGCTCG CCAAGGTCGC CGGTTTCTAA
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Protein sequence | MALSANLFLR QTQSLVMTPQ LMQSIQLLQM THFELNQFIA LEVEKNPLLE FPSNDGEAGG ERGEAEDGEY AHQPEDAGSD DGYDNRTEAL SSDWYDNGGS ASTSRLNDEL DANYTNVFPD DGAPQRLDAP ELVSQWKSMP GSGEGADYDL DDFVAGQVSL RDHLAQQIPF VLPDMADRLI AQNFVDQLDD CGYLQADIVE AGERLGTSLA QAERVLATLQ SLDPPGVFAR SLAECLAIQL KQKDRYDPAM QALVENLELL ARRDFATLKR LCGVDEEDLL DMLGEIRQLN PKPGSGFEAG ISEAIMPDVV VRASSDGGWL VELNPDTLPR VLVNQSYFSR VTKNGEDHAF LSDCLQTANW LTRSLDQRAK TIMKVASEIV RQQDAFLLHG VDYLRPLNLK TVAEAIKMHE STVSRVTSNK YMLTPRGLFE LKYFFTVSIS AVAGGDSHSA EAVRHKIRAL ILQESPEAVL SDDDIVDMLK KGGVDLARRT VAKYREAMNI ASSVQRRREK RALAKVAGF
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