| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0053 |
|---|
| Symbol | |
|---|
| ID | 8011300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 54162 |
|---|
| End bp | 55022 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644822643 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_002973903 |
|---|
| Protein GI | 241202807 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.87191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG ACTTCCACGA TCAGGGACCG CGCAGGGTCG GGCAGGTGAA GGAAGTCACT
TCGCTCGCCA ATCCGATCAT CAAGGACATC AAGGCGCTGA CGAACAAGAA GTCGCGCGAG
GAAAGCGGTA CTTTCCTGGC CGAAGGACTG AAACTCATCA TCGATGCGAT CGAACTCGGC
TGGGCGATCC GCACGCTGGT CTATGCCAAG GCCGCCAAGG GCAAGCCGCT GGTCGAGCAG
ATGGCGGCAA AGACCGTCGC GTCGGGCGGG CTGGTGCTTG AGGTCAGCGA AAAGGTGATC
GCCTCGATCA CCCGCCGCGA CAACCCGCAG ATGGTGGTCG GCATCTTCGA GCAGCGCTGG
ACGCCGCTCA AAGGTATCCG ACTGAGCGAC GGCGAGACAT GGGTGGCGCT CGACCGGGTG
CGCGACCCCG GCAATCTCGG CACCATCATC CGCACGGCCG ATGCGGCGGG GGCTTCCGGC
ATCATACTTC TCGGAGAAAC GACTGATCCT TTCTCGCTCG AAACCGTGCG GGCCACCATG
GGCTCGGTCT TTGCCGTTCC GGTCGCGCGG GCGACGCCCG AGGAATTCAT CGCCTGGCGG
AAATCGGCCG GCGTTTCCGT CGTCGCGACG CATCTTGCCG GCGCGGTCGA TTACCGGACG
ATCGACTACC GGAAAAAGCC CGTCGTGCTC CTGATGGGCA ACGAACAATC CGGCCTGCCG
GAGCAGCTGG CCAGGGAGGC CGACGCGCTT GCCCGCATTC CGCAGCAGGG CCGCGCCGAT
TCGCTGAACC TCGCCGTCGC CACCGCCGTC ATGCTTTTCG AGGCACGCCG CCATCTCCTC
TCACTTGCCG AGGGCAAATG A
|
|---|
| Protein sequence | MSKDFHDQGP RRVGQVKEVT SLANPIIKDI KALTNKKSRE ESGTFLAEGL KLIIDAIELG
WAIRTLVYAK AAKGKPLVEQ MAAKTVASGG LVLEVSEKVI ASITRRDNPQ MVVGIFEQRW
TPLKGIRLSD GETWVALDRV RDPGNLGTII RTADAAGASG IILLGETTDP FSLETVRATM
GSVFAVPVAR ATPEEFIAWR KSAGVSVVAT HLAGAVDYRT IDYRKKPVVL LMGNEQSGLP
EQLAREADAL ARIPQQGRAD SLNLAVATAV MLFEARRHLL SLAEGK
|
|---|
| |