Gene Rleg_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0041 
Symbol 
ID8011288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand- 
Start bp36507 
End bp37127 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID644822631 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002973891 
Protein GI241202795 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.218146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGA AATGCCAGTC TGTCCAAATG ACGCAGAATG ATCGAAAAAT CGCTCAAATC 
CTGGATGCTG CCCTGCCTGT GTTCGTGCGC TTCGGCTTTC GCAAGACTTC CATGGCCGAC 
ATTGCGCGCG CCGCAGGAAT TTCGCGAGCA TCGCTCTATC TGAGCTTCAA CAGCAAGGAA 
GAGCTTTTCC GAGCCGGCTC CATGCGAGCG CATACTCTCG CATTGGATGA GGTGGGAGCG 
GCCCTGGCAG GACAGGGGAA CGCGCTTGAC CGCATGGAAA TGGCCATAGC AGTGTTTCAG 
CGGGAGTTAA TCGCCCCTTT TGGCGGCAGT TCCGATGCAG AAGAACTGTT TGCCGCCAAT 
ATGGCCTTGG CTGCGGATAT CACGCTCGAC GCGCGGACAC GGCTATCGAC TATGCTGACA 
CAGACGCTGA ATGCAGCTGC GGAAACCAAG GAAATCGATC TCGGACCACT GCAGGCCTCG 
CCTCTTCAAC TGGCCAATAT CATGATGGCT GCAATGGATG GGATCAAACA CGCGCAATGG 
AATGGTTCCA GCCTCGATGA CGATACAAAA CTATTCATGC GCCTCTTGCG GGTGGCGGTG 
ACGCCGCGGA GCGGCCAATA G
 
Protein sequence
MVTKCQSVQM TQNDRKIAQI LDAALPVFVR FGFRKTSMAD IARAAGISRA SLYLSFNSKE 
ELFRAGSMRA HTLALDEVGA ALAGQGNALD RMEMAIAVFQ RELIAPFGGS SDAEELFAAN 
MALAADITLD ARTRLSTMLT QTLNAAAETK EIDLGPLQAS PLQLANIMMA AMDGIKHAQW 
NGSSLDDDTK LFMRLLRVAV TPRSGQ