Gene Rleg_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0004 
Symbol 
ID8015385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4105 
End bp4749 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID644822595 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_002973855 
Protein GI241202759 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.933245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00157878 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCAAGC TTGAAACGAA GACCATCGTC GTTGCCAGCC ACAATGCCGG CAAGATCCGC 
GAGATCCAGG AATTGATCGG GCCGCTCGGC TTCACCGCCA AATCGGCCGC CGAGCTGAAT
TTCGTCGAGC CGGATGAGAC CGGCACGAGC TTCGAGGAGA ATGCGACGAT CAAGGCAGTC
GCCTCGGCCA ATGCCTCAGG CATGCCGGCG CTGTCGGACG ATTCCGGGCT GGTGGTCGAT
GCACTCGGCG GCGATCCCGG TGTCTACACC GCCAATTGGG CGGAGAAGGC CGACGGCACG
CGCGATTTCG ACATGGCGAT GGCCAAGGTG GAAAAGGCGC TGCAGGATGC GGGCGCGACA
AAGCCGGAAC AGCGCACGGC GCGTTTCATC AGCGTGCTCT GCCTTGCCTG GCCGGACGGG
CATACAGAGC TGTTTCGCGG CGAGGTGGAA GGCAGTGTCG TCTGGCCGCC GCGCGGCACC
CAGGGCTTCG GTTACGATCC GGTCTTCCAG CCCGAGGGCT ACGACATCAC CTTCGGCGAA
ATGAGCGGCG AGGAAAAACA CGGCTGGAAC GTCGGCAAGC CGCAAGCGCT GTCGCACCGT
GCCCGCGCCT TCAAACTCTT TGTTGAAACC TGCCTGGAGG CATAA
 
Protein sequence
MRKLETKTIV VASHNAGKIR EIQELIGPLG FTAKSAAELN FVEPDETGTS FEENATIKAV 
ASANASGMPA LSDDSGLVVD ALGGDPGVYT ANWAEKADGT RDFDMAMAKV EKALQDAGAT
KPEQRTARFI SVLCLAWPDG HTELFRGEVE GSVVWPPRGT QGFGYDPVFQ PEGYDITFGE
MSGEEKHGWN VGKPQALSHR ARAFKLFVET CLEA