Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1897 |
Symbol | |
ID | 6980636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1941164 |
End bp | 1942438 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643396620 |
Product | FeS assembly protein SufD |
Protein accession | YP_002281408 |
Protein GI | 209549491 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00363376 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACATGC AGACGACGAG CCGCCTTACT GCGGCCGAAA CGGCGCTGAT CGAGGCTTTC AACCATCAGA TCGGCGATCT GCCGGGCAAT GGTGCGGTGA CGGCGCTGCG CGACCGGCTT CTCGATGATC TGAAGAAGGC CGGCCTGCCG ACGCGCCGCA TCGAAGCCTG GCACTACACC GATCTGAAAA ACCTGCTGCG CACCTTGCCG CCGCAGGTCG GTGACGCCGG CTCCGACGCG CTTGAGCCGC TCGTAGACGG CTCCACCGTG CTGGCGGTGA TCCAGGGCCA TGCCAGCCAG AAGGCTGCCG CCGACGGTCT TGGCGTTTCG GCCTATAGCG AACATCTGCT CGACGGCTCT GCCGCGGACG GGCTCGATGC GCTCGGCAGC GACGATGCGG TCGGCCGCAT CAATGGCAGC TTCGTGCGCG ACGGTTATGT CGTCGACGTG CCTGCCGATA CCGAGCTTGA CGCTCCGCTC GAAATCCAGT TCGTCCATGC CGGCGGGCAG ACACATACGC GTCTTCCTGT TGCCTTCGCC TCCGGCGTCA AAGCGACGGT GATCGAGCGT CATCTTGCGG TGACCGGCGA TCCGGCGCTC GTGTCCCACG TCAGTGACAT CACTGTCGGC GAAGGTGCGG AGCTGACCTG GATCATCCTG CAGCAGCACG GGGTCGAGGA TACGCATCTC GGCCAGATCC GCATCGATCT CGGTGCCGAC GCCAAGCTTC GCCTGTTCGT CATCAATGCC GGCGGCAAGC TGGTGCGCCA GGAGCTGCAT ATCAAGGTGA CGGGCGAGGG CGCCGATCTG ACGCTGCGCG GGATCAATCT GCTCGGTGCC GACAGCCATA CCGACGTGAC GATGGTGCTC GGCCACGACG TGCCGCACAC CGGCTCGACC GAAGTGATCC GCAATGTCGT CTTCGACCGC GCCAAGGGTG TTTTCCAGGG CATGATCCGG GTGGCGCCCG ATGCGCAGAA GACCGATGCC AAAATGGCCT GCAACACGCT TCTGATGTCC GACGATGCCG AATTCTCGGT CAAGCCTGAG CTCGAAATCT TCGCCGACGA CGTGCAGTGC GGCCATGGGG CGACGGTGAC CGATATCGAC GCCAATCATC TCTATTACAT GATGGCGCGC GGCATTCCGG AGAACAAGGC GCGGGCGATG CTCGTCAACG CTTTTGTCGC CGAGATCGTC GAGGAACTGG AAGACGAGGC CCTGGTCGAA GCGCTGGAAG GCGTGATTTC GGCCTGGCTC GAAAAGCACG CCTGA
|
Protein sequence | MNMQTTSRLT AAETALIEAF NHQIGDLPGN GAVTALRDRL LDDLKKAGLP TRRIEAWHYT DLKNLLRTLP PQVGDAGSDA LEPLVDGSTV LAVIQGHASQ KAAADGLGVS AYSEHLLDGS AADGLDALGS DDAVGRINGS FVRDGYVVDV PADTELDAPL EIQFVHAGGQ THTRLPVAFA SGVKATVIER HLAVTGDPAL VSHVSDITVG EGAELTWIIL QQHGVEDTHL GQIRIDLGAD AKLRLFVINA GGKLVRQELH IKVTGEGADL TLRGINLLGA DSHTDVTMVL GHDVPHTGST EVIRNVVFDR AKGVFQGMIR VAPDAQKTDA KMACNTLLMS DDAEFSVKPE LEIFADDVQC GHGATVTDID ANHLYYMMAR GIPENKARAM LVNAFVAEIV EELEDEALVE ALEGVISAWL EKHA
|
| |