| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4079 |
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| Symbol | |
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| ID | 3961777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4547343 |
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| End bp | 4550000 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637918903 |
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| Product | hypothetical protein |
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| Protein accession | YP_525308 |
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| Protein GI | 89902837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.299167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATATT CTGAACTTTC AAGTCAAAAA AGAGCGGGGC CGCATTGGCT CAAGTTCGCT
GCGGCGGGCT TGCTCGCGGC TGCCATTGCT GGTTGCGGTG GTAGCGATGG CGCTGCTGGC
CCGGCCGGCG CGACCGGACC TGCCGGGGCG ACTGGCCCCG CTGGCACACC TGCCGTTCCC
ACAGTCAGTG TCGCAGCCCT TACGCCTGCA CAGTGGGCGG ATGCCAATTT TACCGGTGTC
GTCACTGGCG TTACCATCGC CAGCCCGCCG GTCGTCAGCT TCAAGGTGAC TGATGCCACT
GGCGCCCCCG TCATCGGTCT GGGTAGCACC TCCAAGAGCG CTACTGCAAA GTTCGCAAGT
TATCCCAACC TGGCGTTCGC ATTGGCCAAA TTGGTACCAG CGGCCAACGG CAGCCCCAGC
AAGTGGGTCA GCTACAACGT GACCACCGTA GAGACATCAA CCGCCGCTAT CACCGCCAGC
AAACCCACCA CCGACAACAC CGGCACGCTG GTAGACAACG GTGACGGTAG CTACAAATAC
ACCTTCTACC GAGATATCAC CAAGGCCAAG GATGTGGTTG CGGCGCTCAC CCTGACCGGC
GCCAACAAGG CCGCCGACCT GGGCGACTTG ACCTACGATC CGACTCTGAC CCACCGTCTG
GTGCTGCAGC TTTCGGGCAA TGCGCCTGGA ACCGGCACCA ACACGGCCGA TGCCGTTCAG
GTGACCCCAG GGGTTGCCAT GAAGAACCCG CTGAACGTCA TTTATGACTT CATCCCTGCC
TCCGGCAAGG TCGTCACTGA CACCGACACG CAGCGCGAAA TTGTGGCGAT TGCCTCATGC
AACCAATGCC ACAGCAAGCT GGCGTTTCAT GGCGGTGGTC GTGTTGACAC CCGGTATTGC
GTGGTCTGCC ACAGTGACCA GCGCAAGTAC AGCAACGCTG AAGCAGCCAC CACATCTACC
GGCTATTCTG GCAGCACGTA CCGGATCAAC GACAAGGCAG TCGGTAATTT CCCGATGTTC
GTGCACGCAC TTCATAAGGG CAAAGAGTTG ACCAAGACCG GCTACAACTA CGCCAACGTC
CTGTTCAACG AAATCGGCTA CCCACAACCG ATCACCAACT GCGTCAAGTG CCATGATGGT
TCCGCTACGG CCAAGAACAA GACGGCGCAA GGCGACAACT GGAAGAATGT CCCGAATCTG
GTTGCGTGCG GCTCGTGCCA TGACAATGTC AACTTTGCCA CGGGTGCCAA CCACATTGGC
GGTGCCAAGG CTGACGACAA GCTGTGTGCA CTTTGCCACG ACGCAAGTTC GATCGCTTCG
GTCTACCACG TGACGGTTGA TCCGACCGGC GCGAATGGCC GTGGTGGTTA TCCGTTGAAC
ACTGCAGATA ACGTGCCCAC CCCCGGTTTC CCGTCGGGCC AAGGTCCGTC GATCCCGCTG
GCTTCGCAAC TGAATCTGCC AGCCGGTGTC TACAAGATTG GTCTTGAAAT CAAATCGGTC
ACGGTTGCCG GTGCCGCAGG CGCCAAAAAA GCCACTGTCG TTTACCGTGT CCTGAAAGAC
GGTGCGCCAG TGACTTTGAA TACCACGGGT AATTTGATTA CCGGTGTTGA CGGCACACCG
GACATCTATT TGGCCTACGG TGTACCGCAG GATGGTCAAC CAGCGGATGG CAGCACAGTG
GTCGACTGGA ATGCAAGCCA ATCCGTGCAT GTCAGCGACA TCGTGGCAAC GCAAGGTGCT
CCCGCTGCAG ATGGCTGGTA CACCGTGGTG GTGAACAAGA TCATTCCGGA CAACGCCAAG
ATGGTTACGG CCGGCCTGGG CATCAACTAC AACGGTTTTG TTCAGTTGAA CAATGCAGCC
TATCCGAAGG GCATCCGCCT GCGCGAGCCC AAGTTCGCCA TGATGACTGC AACCGGTTAC
ACCGCTCGTC GCGCCGTGGT CGATGGTGAT AAGTGCAATA GCTGCCACGG CCAATTGGGT
GTCGCTCCGT CCTTCCACAG CGGTGCCCGT AACAACGGCG CTGGCTGCGT AATGTGCCAC
ACCCCCAACA ATTCGACCGG CCATACCGGG GCGGCGAATA ATTTTGGCGG TGGCTGGTCA
GTCAGCGGCA AGAACCTGAT TCACTCCATC CACGCGTCAG GCAAGCGGGA ACAAGCGTTC
ACCTACGAAG CAACCGCCGC GAACCCGAAC GGCTTCCAGG AAGTTACTTA TCCTGGTGTG
CTGAACAAGT GTGAACAGTG CCACGTGGCT GGTAGCTATG ACTTCAGTGC CTCGGCCAAT
GCTGCGGCGT TGCCTAACCT GTTGTGGACC ACTGAGGCAA AGACCGACAT GAGCAATCCT
ACGTCGGCTC CTTCGATCGG ACTCTCACCA TGGGTTACCA CATTGGGCGC AGGACAGGCG
AACTATTCCA CTACAGGTAC TTTACCGCTT GGCAATCTGG TGACATCACC GGTGACATCG
TCCTGCTTCG GTTGCCACGA CAGCAAGACA GCGGTCGCGC ACATGCAACT CAACGGCGGC
ACCATTTACG GCTTGGTTTC AGCCGTTTCT GTTAGCAAGA CCACCGACCG CTCACAGGGC
TTCGCCAAAG TCGAATCCTG CACGGTCTGC CATGGTACCG GCAAGGTGGC CGACATCAAG
GTTGTTCACA TGAACTAA
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| Protein sequence | MKYSELSSQK RAGPHWLKFA AAGLLAAAIA GCGGSDGAAG PAGATGPAGA TGPAGTPAVP
TVSVAALTPA QWADANFTGV VTGVTIASPP VVSFKVTDAT GAPVIGLGST SKSATAKFAS
YPNLAFALAK LVPAANGSPS KWVSYNVTTV ETSTAAITAS KPTTDNTGTL VDNGDGSYKY
TFYRDITKAK DVVAALTLTG ANKAADLGDL TYDPTLTHRL VLQLSGNAPG TGTNTADAVQ
VTPGVAMKNP LNVIYDFIPA SGKVVTDTDT QREIVAIASC NQCHSKLAFH GGGRVDTRYC
VVCHSDQRKY SNAEAATTST GYSGSTYRIN DKAVGNFPMF VHALHKGKEL TKTGYNYANV
LFNEIGYPQP ITNCVKCHDG SATAKNKTAQ GDNWKNVPNL VACGSCHDNV NFATGANHIG
GAKADDKLCA LCHDASSIAS VYHVTVDPTG ANGRGGYPLN TADNVPTPGF PSGQGPSIPL
ASQLNLPAGV YKIGLEIKSV TVAGAAGAKK ATVVYRVLKD GAPVTLNTTG NLITGVDGTP
DIYLAYGVPQ DGQPADGSTV VDWNASQSVH VSDIVATQGA PAADGWYTVV VNKIIPDNAK
MVTAGLGINY NGFVQLNNAA YPKGIRLREP KFAMMTATGY TARRAVVDGD KCNSCHGQLG
VAPSFHSGAR NNGAGCVMCH TPNNSTGHTG AANNFGGGWS VSGKNLIHSI HASGKREQAF
TYEATAANPN GFQEVTYPGV LNKCEQCHVA GSYDFSASAN AAALPNLLWT TEAKTDMSNP
TSAPSIGLSP WVTTLGAGQA NYSTTGTLPL GNLVTSPVTS SCFGCHDSKT AVAHMQLNGG
TIYGLVSAVS VSKTTDRSQG FAKVESCTVC HGTGKVADIK VVHMN
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