Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0671 |
Symbol | |
ID | 3963856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 698304 |
End bp | 700163 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637915502 |
Product | asparagine synthase, glutamine-hydrolyzing |
Protein accession | YP_521953 |
Protein GI | 89899482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.403127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAACG TGACCCGACA TCGGGGGCCT GACGACGAGG GTATGCACAT CGACGGTCCC TGCGGCATTG CCATGCGCCG ACTGTCAATC ATTGATCTGG CGGGGGGGCA TCAACCCCTG TCCAACGTTG ACGAAACACT CTGGGTGGTC TGCAACGGCG AGATTTATAA CTACCGGGAG TTGCGCTCTG AACTCCAGGC CAAAGGCTAT CACTTCAAGA CCGGGTCTGA CAGTGAAGTG CTGTTGCACC TCTATGAGGC CGAAGGTGAC GACTTTGTGC TGCGCCTCAA TGGCATGTTC GATTTTGCGC TATGGGATGT TCGTCGTCAT CGTCTGTTGA TTGGCCGTGA CCGGCTCGGG GTCAAGCCGC TTTATGTGAT GCAGGACGGC CAGCGATTGG CGTTTGCGAC CGAGGCCAAG GCGCTGCTCA CATTGCCCGG CGTCAGCGCC GAGTTGAATC GCAGTGCTGT CGCCAGCTAC TTGCACCTGG GCTATGTCGC TGCGCCCGAC TGCATCTTCA AGGGTATTCG CAAATTGCCG CCCGCCACGC TTCTCGCCGT TGAAAACGGC CAAGTGCGCG AGTGGCGTTA TTGGCGACTT TCCCCGCGCA TGAATCAGGA TCTGTCAGAG CGTGAGTGGA TCGAGCGGGT TCGGGCGCAG CTAGACGCGT CAGTGCGCAT GCAGATGGTG AGTGACGTGC CAATTGGTGC CTTCCTGTCC GGGGGGGTCG ATTCCAGCGC CGTGGTCGGA TTCATGGCGA AGCATTCCCA GCAGCCGATA CGCACTTACG CCATTGGCTT TAGCGGCGGC GAAGCAGAGG CGCTCTATAA CGAGTTACCT TATGCCCGTC GTGTGGCTGA GCTTTTTGGC ACGCAGCATC GTGAGATTGT GGTTCGTCCC GACGTCGTTT CCCTGCTGCC CAAACTGCTG TGGCACATGG ATGAGCCGTT GTCAGACACC GCATTCATCA CCACTTTTCT GGTGTCCGAG TTCGCCCGGC AGGATGTCAA AGTGATTCTC TCAGGTGTCG GCGGGGATGA ACTCTTTGGT GGCTATCGCC GTTATCTGGG CGACCACTAT GCGCAGCAAT ACCGCCGACT GCCGGGCTGG TTGCGGCGCT CTGCTGCGTC TGTCGCCGGG TGCTTGCCGG TTGACCGTCA CTCCGGCTTG CTTAATACCT TGCGCCTGGC CAAAGGATTT CTCTCTTCGG CAGAAATGGG TGCCGATGAC CGCTATCGCA GCTACCTTCA GGTGCTGGAT CGGGAAGCCG TCTCCGCGCT ATTGATGCAA CCCGATGCCG CTCAAACTGA TCCGCTGGAG CTGGCCTTTG CCGGGGCGGG CCATGAAGAT CCCCTCAATC GCATGTTTGC CGTGGATGCG CAAACACAGT TGCCCGATGA CTTGCTGATG TTGACCGACA AAATGAGCAT GGCCGTCTCT CTTGAATGCC GTGTGCCGCT GCTGGACCAT CAACTGGTGG AACTGGCCGC CTCCATGCCT GCTGCGATCA AAGTGCGCGG TGGTCACCTC AAGTATGTCC TGAAGGAAGC CTTGAGTGAC CTTCTCCCTG CGGACATTCT GGAGCGAAAA AAGCGCGGCT TCGGAACCCC CATGGGGGCA TGGCTCAAGA ACGAACTCGC TCCCTTGCTG GGGCGCCTGC TGGCGTCTGA TGTGATCCAG CGGCGCGGAC TCTTTCGCCA GCCCGTGATT GACCGGCTCG TCGCCGATCA CCAGGCCAAT CGCTTCGACG GCACCGATGT CTTGCTGGCC CTGCTCAATT TGGAAATCTG GAGCCGGATT TATCTGGATC ATCGCGATCC GACTGACGTT GCGGCCGAAC TCAAAGGCTA CGCCTCATGA
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Protein sequence | MGNVTRHRGP DDEGMHIDGP CGIAMRRLSI IDLAGGHQPL SNVDETLWVV CNGEIYNYRE LRSELQAKGY HFKTGSDSEV LLHLYEAEGD DFVLRLNGMF DFALWDVRRH RLLIGRDRLG VKPLYVMQDG QRLAFATEAK ALLTLPGVSA ELNRSAVASY LHLGYVAAPD CIFKGIRKLP PATLLAVENG QVREWRYWRL SPRMNQDLSE REWIERVRAQ LDASVRMQMV SDVPIGAFLS GGVDSSAVVG FMAKHSQQPI RTYAIGFSGG EAEALYNELP YARRVAELFG TQHREIVVRP DVVSLLPKLL WHMDEPLSDT AFITTFLVSE FARQDVKVIL SGVGGDELFG GYRRYLGDHY AQQYRRLPGW LRRSAASVAG CLPVDRHSGL LNTLRLAKGF LSSAEMGADD RYRSYLQVLD REAVSALLMQ PDAAQTDPLE LAFAGAGHED PLNRMFAVDA QTQLPDDLLM LTDKMSMAVS LECRVPLLDH QLVELAASMP AAIKVRGGHL KYVLKEALSD LLPADILERK KRGFGTPMGA WLKNELAPLL GRLLASDVIQ RRGLFRQPVI DRLVADHQAN RFDGTDVLLA LLNLEIWSRI YLDHRDPTDV AAELKGYAS
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