Gene Rfer_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0671 
Symbol 
ID3963856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp698304 
End bp700163 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content59% 
IMG OID637915502 
Productasparagine synthase, glutamine-hydrolyzing 
Protein accessionYP_521953 
Protein GI89899482 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAACG TGACCCGACA TCGGGGGCCT GACGACGAGG GTATGCACAT CGACGGTCCC 
TGCGGCATTG CCATGCGCCG ACTGTCAATC ATTGATCTGG CGGGGGGGCA TCAACCCCTG
TCCAACGTTG ACGAAACACT CTGGGTGGTC TGCAACGGCG AGATTTATAA CTACCGGGAG
TTGCGCTCTG AACTCCAGGC CAAAGGCTAT CACTTCAAGA CCGGGTCTGA CAGTGAAGTG
CTGTTGCACC TCTATGAGGC CGAAGGTGAC GACTTTGTGC TGCGCCTCAA TGGCATGTTC
GATTTTGCGC TATGGGATGT TCGTCGTCAT CGTCTGTTGA TTGGCCGTGA CCGGCTCGGG
GTCAAGCCGC TTTATGTGAT GCAGGACGGC CAGCGATTGG CGTTTGCGAC CGAGGCCAAG
GCGCTGCTCA CATTGCCCGG CGTCAGCGCC GAGTTGAATC GCAGTGCTGT CGCCAGCTAC
TTGCACCTGG GCTATGTCGC TGCGCCCGAC TGCATCTTCA AGGGTATTCG CAAATTGCCG
CCCGCCACGC TTCTCGCCGT TGAAAACGGC CAAGTGCGCG AGTGGCGTTA TTGGCGACTT
TCCCCGCGCA TGAATCAGGA TCTGTCAGAG CGTGAGTGGA TCGAGCGGGT TCGGGCGCAG
CTAGACGCGT CAGTGCGCAT GCAGATGGTG AGTGACGTGC CAATTGGTGC CTTCCTGTCC
GGGGGGGTCG ATTCCAGCGC CGTGGTCGGA TTCATGGCGA AGCATTCCCA GCAGCCGATA
CGCACTTACG CCATTGGCTT TAGCGGCGGC GAAGCAGAGG CGCTCTATAA CGAGTTACCT
TATGCCCGTC GTGTGGCTGA GCTTTTTGGC ACGCAGCATC GTGAGATTGT GGTTCGTCCC
GACGTCGTTT CCCTGCTGCC CAAACTGCTG TGGCACATGG ATGAGCCGTT GTCAGACACC
GCATTCATCA CCACTTTTCT GGTGTCCGAG TTCGCCCGGC AGGATGTCAA AGTGATTCTC
TCAGGTGTCG GCGGGGATGA ACTCTTTGGT GGCTATCGCC GTTATCTGGG CGACCACTAT
GCGCAGCAAT ACCGCCGACT GCCGGGCTGG TTGCGGCGCT CTGCTGCGTC TGTCGCCGGG
TGCTTGCCGG TTGACCGTCA CTCCGGCTTG CTTAATACCT TGCGCCTGGC CAAAGGATTT
CTCTCTTCGG CAGAAATGGG TGCCGATGAC CGCTATCGCA GCTACCTTCA GGTGCTGGAT
CGGGAAGCCG TCTCCGCGCT ATTGATGCAA CCCGATGCCG CTCAAACTGA TCCGCTGGAG
CTGGCCTTTG CCGGGGCGGG CCATGAAGAT CCCCTCAATC GCATGTTTGC CGTGGATGCG
CAAACACAGT TGCCCGATGA CTTGCTGATG TTGACCGACA AAATGAGCAT GGCCGTCTCT
CTTGAATGCC GTGTGCCGCT GCTGGACCAT CAACTGGTGG AACTGGCCGC CTCCATGCCT
GCTGCGATCA AAGTGCGCGG TGGTCACCTC AAGTATGTCC TGAAGGAAGC CTTGAGTGAC
CTTCTCCCTG CGGACATTCT GGAGCGAAAA AAGCGCGGCT TCGGAACCCC CATGGGGGCA
TGGCTCAAGA ACGAACTCGC TCCCTTGCTG GGGCGCCTGC TGGCGTCTGA TGTGATCCAG
CGGCGCGGAC TCTTTCGCCA GCCCGTGATT GACCGGCTCG TCGCCGATCA CCAGGCCAAT
CGCTTCGACG GCACCGATGT CTTGCTGGCC CTGCTCAATT TGGAAATCTG GAGCCGGATT
TATCTGGATC ATCGCGATCC GACTGACGTT GCGGCCGAAC TCAAAGGCTA CGCCTCATGA
 
Protein sequence
MGNVTRHRGP DDEGMHIDGP CGIAMRRLSI IDLAGGHQPL SNVDETLWVV CNGEIYNYRE 
LRSELQAKGY HFKTGSDSEV LLHLYEAEGD DFVLRLNGMF DFALWDVRRH RLLIGRDRLG
VKPLYVMQDG QRLAFATEAK ALLTLPGVSA ELNRSAVASY LHLGYVAAPD CIFKGIRKLP
PATLLAVENG QVREWRYWRL SPRMNQDLSE REWIERVRAQ LDASVRMQMV SDVPIGAFLS
GGVDSSAVVG FMAKHSQQPI RTYAIGFSGG EAEALYNELP YARRVAELFG TQHREIVVRP
DVVSLLPKLL WHMDEPLSDT AFITTFLVSE FARQDVKVIL SGVGGDELFG GYRRYLGDHY
AQQYRRLPGW LRRSAASVAG CLPVDRHSGL LNTLRLAKGF LSSAEMGADD RYRSYLQVLD
REAVSALLMQ PDAAQTDPLE LAFAGAGHED PLNRMFAVDA QTQLPDDLLM LTDKMSMAVS
LECRVPLLDH QLVELAASMP AAIKVRGGHL KYVLKEALSD LLPADILERK KRGFGTPMGA
WLKNELAPLL GRLLASDVIQ RRGLFRQPVI DRLVADHQAN RFDGTDVLLA LLNLEIWSRI
YLDHRDPTDV AAELKGYAS