Gene Rcas_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4321 
Symbol 
ID5541832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5570933 
End bp5571517 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content52% 
IMG OID640896425 
ProductNusG antitermination factor 
Protein accessionYP_001434363 
Protein GI156744234 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0895327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAG AGAAAAAAGA ACAGGAAATC CAGCCCGAGT CGGAGATACG CGATGATGAT 
CGTCGCTGGT ATGTGATTCA TACCTACTCC GGCTATGAGA ACAAAGTGAA GCAAAACCTG
CTCCATCGCA TTGAGACGAT GGAAATGCGT GATCAGATTT TCAACGTCAT CGTGCCGACG
GAAGAGGAAA TTGAAATCAA AAATGGTCAG CGCCGCACAG TTCAGAAAAA GGTGTTTCCT
GGATATGTGC TGGTGCAGAT GAAAATGAAC GACAACTCCT GGTATGTCGT TCGCAATACG
CCGGGTGTGA CGAGTTTCGT CGGGCATGGG AATAAGCCGA CGCCGCTTGA AGAAGAAGAG
GTGAAGGCGA TCCTGAAGCA GATGGAACAG GAAGCGCCTA AGGTGAAGGT GAGTTATCAG
GTTGGTCAGG CGGTCAAGAT TACGGATGGT CCGTTCACCG ACTTCGAGGG GATCGTGGAC
GCAATTGACC ACGAGCGTGG TCGTGTGCGG GTGCTGGTCT CGTTCTTCGG TCGTGAGGCG
CCGGTCGAAC TGGACTTCCT TCAGGTGACG CGCCTGGTCG AATAG
 
Protein sequence
MTEEKKEQEI QPESEIRDDD RRWYVIHTYS GYENKVKQNL LHRIETMEMR DQIFNVIVPT 
EEEIEIKNGQ RRTVQKKVFP GYVLVQMKMN DNSWYVVRNT PGVTSFVGHG NKPTPLEEEE
VKAILKQMEQ EAPKVKVSYQ VGQAVKITDG PFTDFEGIVD AIDHERGRVR VLVSFFGREA
PVELDFLQVT RLVE