| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4026 |
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| Symbol | rplC |
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| ID | 5541536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5224956 |
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| End bp | 5225588 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896138 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001434077 |
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| Protein GI | 156743948 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000729954 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCGAAG GATTGCTTGG GCGCAAGATC GGCATGACCC AGGTTTTCGA CCCAACCGGT
CAGGTCATTC CGGTGACCAT TATTGAAGTG GGTCCCTGCG TCGTCACGCA AATCCGCACA
AAAGAGCGGG ATGGGTACGA AGCCGTCCAG ATCGGGTACC AGGAGGTTCG GGCGAAAAGC
CTGACAAAAC CTGAGCAGGG GCATCTGCGC GGCGCGGGGA AGCTGTTGCG CCACCTGCGC
GAGTTCCGTA CCGACAATAT TGCCGATCAT AAGGTCGGTG ATGTATTGAC CGTCGAGATG
TTCGCGCCAG GTCAGCGGGT CGACGTCATT GGCACGTCAA AAGGTCGCGG GTTCCAGGGT
GTGGTGAAAC GCCATGGCTT CGGCGGCGGT CCACGCACGC ATGGTCAGAG CGACCGCCTG
CGCGCGCCGG GTTCGATCGG CGCCGGCACC GATCCGGGTC ACCTGTGGAA GAATACGCGG
ATGGCCGGGC GGATGGGCAA TCAACGGGTG ACCGTGCAAA ACCTGACCGT TGTCGATGTC
GTTCCAGAGC GCAATCTGCT GCTCGTGCGC GGCTCGGTCC CGGGCGCCAA CAACGGATTG
GTGATGGTTC GCCGGGCAAT TAAGGGCTCG TAG
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| Protein sequence | MIEGLLGRKI GMTQVFDPTG QVIPVTIIEV GPCVVTQIRT KERDGYEAVQ IGYQEVRAKS
LTKPEQGHLR GAGKLLRHLR EFRTDNIADH KVGDVLTVEM FAPGQRVDVI GTSKGRGFQG
VVKRHGFGGG PRTHGQSDRL RAPGSIGAGT DPGHLWKNTR MAGRMGNQRV TVQNLTVVDV
VPERNLLLVR GSVPGANNGL VMVRRAIKGS
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