Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3636 |
Symbol | |
ID | 5541138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4752273 |
End bp | 4753241 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640895756 |
Product | glycosyl transferase family protein |
Protein accession | YP_001433703 |
Protein GI | 156743574 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.281554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0212445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCACC TGCACACACA ATCAGATCAA GCCGCTGCTC CCGGCACGCC GCGCGTCAGC GTCGTCATTC CCTGTTACAA CCAGGCGCGC TTTCTGCCCG AAGCGGTCGC CAGCGTGGTA GCGCAGACCT TCACCGACTG GGAGATCATT ATCGTCGACG ACGGCAGCCC TGATGATACT GCGACCGTCG CGCAACGCCT GATCGCTGCG CACCCGGATC GGCGCATTCG CCTGATCCGC CAGGAGAATC GCGGGCTGGC AGAGGCGCGC AATGCGGGGA TTCGCGCGGC GCGCGCGCCG TACATCCTGC CGCTCGACGC CGACGACATA ATCGAACCGG AGATGCTGGC GCAGACGGTA GCGGCGCTCG ATGCGCGTCC TGGGGTCGGA TTCGTGTACA CCGATGTGCG TCGGTTTGGT GCGGAAAATA ACGTCCTGCG CACGCTGCCG TACAGTCTGG AGCGGTTACG TTTCGAGAAC CTGATGATGC CGGCGACCCT TTTCCGTCGA GAGGCGTGGG AGCAGGTTGG CGGGTTCCAG GCTTTCAGCC CGATTCAGGG GTATGAAGAC CGCGAGTTTT GGGTGAGTCT GGCGGATGCC GGGTGGCAGG GATGGCACAT CCCGCAGCCG CTGCTGCGCT ACCGGCGCGC GGAAGGGAGT ATGCTCTCGC AGGCGCGCCG CCACGACCTT GAGCTGCGCG CGAAGATTTT CCTCCGTCAC CCGCGCCTCT ACGAACCCGA TGTACTCGCC TGGGCGCGGC GCGTTCTGTC GTCCGAATGG AGCGTCAACG GCGCGTTGCG GTCACCATGG CATCGGTTGC TGGCGTACCT GGGGTATGTG GCACTGATCC GGCGACATCA TCCGCCGTTG CTCCTGCCGA CGATTGTTCA CCCGTTCTTC TGGCGGCTGC CGATCCGCTG GCAGGGACGC CTGCGCGCGC TGGCGCGTCT GGCGCGGTTG CAGCGTTAA
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Protein sequence | MPHLHTQSDQ AAAPGTPRVS VVIPCYNQAR FLPEAVASVV AQTFTDWEII IVDDGSPDDT ATVAQRLIAA HPDRRIRLIR QENRGLAEAR NAGIRAARAP YILPLDADDI IEPEMLAQTV AALDARPGVG FVYTDVRRFG AENNVLRTLP YSLERLRFEN LMMPATLFRR EAWEQVGGFQ AFSPIQGYED REFWVSLADA GWQGWHIPQP LLRYRRAEGS MLSQARRHDL ELRAKIFLRH PRLYEPDVLA WARRVLSSEW SVNGALRSPW HRLLAYLGYV ALIRRHHPPL LLPTIVHPFF WRLPIRWQGR LRALARLARL QR
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