| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3336 |
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| Symbol | |
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| ID | 5540834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4352886 |
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| End bp | 4353665 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895453 |
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| Product | thioredoxin |
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| Protein accession | YP_001433404 |
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| Protein GI | 156743275 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.17955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTT CAACACCTGT CCGCACAAGC GAGCAAAGCA TCGACCGCGT GCTGCGTGCG
GGTTTGCCGG TGCTGCTGAT CTTCGACCGC AAAGAATGCC CGACCTGTCA GCGACTCGAT
CCAACACTCG AACGGTTGGC GTCGATCTTT GCCGGGCGCG CGCTGCTGGC ACGGGTAGAT
GCCGACGATA ATCCGGCGTT GGCGCAACAA TACGGCATTA CTGCACTTCC CGGTCTGATT
TTTGTGAAGA ATGGCGCACC CATTGCGCGA ACAAGCGGCG TTGTTGCTGA GGAAGCGCTG
CGCGCATGGT TGACACATCT GACCGATGGC GGCGCACCGC CGCCCCTGCC GCAAGGTCCG
AGCGTGCCGC TGACGCGCCA GGCGTCGCGC CCGATGCCTG AACCCTCGGC AACACGCCAG
GAAGTAGCGG AACGTGCCAC GCGATCGAAA CCGATCACGC TCACTGATGC GACATTCGAT
CAGGTTGTCG GCGCTAGCCA TCAACCGGTG CTGGTCGACT TTTGGGCGCC ATGGTGTGGT
CCGTGCCGCG CGGTGGCGCC GGTAGTCGAA CGGTTGGCGC AGGAATTTGC CGGACGCGCA
GTGGTTGCCA AACTGAACGT GGATGAAAAC CCGCGCACGG CGCAGCGGTT TGGCATCAGG
AGCATCCCAT CGCTCCACAT TTTCAAAGAT GGGCGCGTCG TGGAACGTCT GATCGGCGCC
CAACCCTATC CGGTGTTGCG TCAGGCGCTG GAGCGGCATG CTGGAGGCGT TACAGCATGA
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| Protein sequence | MTFSTPVRTS EQSIDRVLRA GLPVLLIFDR KECPTCQRLD PTLERLASIF AGRALLARVD
ADDNPALAQQ YGITALPGLI FVKNGAPIAR TSGVVAEEAL RAWLTHLTDG GAPPPLPQGP
SVPLTRQASR PMPEPSATRQ EVAERATRSK PITLTDATFD QVVGASHQPV LVDFWAPWCG
PCRAVAPVVE RLAQEFAGRA VVAKLNVDEN PRTAQRFGIR SIPSLHIFKD GRVVERLIGA
QPYPVLRQAL ERHAGGVTA
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