Gene Rcas_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2784 
Symbol 
ID5540270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3600697 
End bp3601308 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID640894910 
Producthypothetical protein 
Protein accessionYP_001432873 
Protein GI156742744 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG TCACACCATT TCCCGCTGTG CCGTCGCTAC GCTCAATCGA TACCGGCTGG 
AACTATGAGC GCTGGTCTGC TCTACCAGAT GATGGCAACC GGTATGAAGT CATCGACGGA
GTCCTGTTTG TGACTCCTGC GCCGAGTTTT TTTCACCAAT GGATCGTTCG CCAGATCGTG
CTGCTGCTGG TGGAGCAGAT TGACCGTCTA GGCATTGGTC TGACCGCATG GGCGCCGATT
GGTGTGCGTA TGCCAGGGTG TGATCCGGTG CAACCCGACA TTGTCGTTGT GCGCAATGAG
GATCGCAGCA TGATCTATGA TCGCCGCATC AATGGCGTGC CTGCCTTAAT CGTTGAGGTG
TTGTCGCCAT CCAATCCCGA GACCGATACA GAAATCAAAC GTGCAGCATA TGCGCGTGCC
GGGTTGCCGG AGTACTGGAT CGTGCGCCCG GCTGAGCGCG ATGTCCTGGT ATGCACCCGT
CCCGATTCGG TTGTTGGCGA TTTCCTCGAA GTCTTCACCA TTGCCCCTGA TGGCACGCTT
TTGTCACCGA CACTTCCATT CCGCGCCCAG GTCGCCGGCT TCTTCGCAGG TTCGCCGGAC
GAAACGCTTT AG
 
Protein sequence
MTTVTPFPAV PSLRSIDTGW NYERWSALPD DGNRYEVIDG VLFVTPAPSF FHQWIVRQIV 
LLLVEQIDRL GIGLTAWAPI GVRMPGCDPV QPDIVVVRNE DRSMIYDRRI NGVPALIVEV
LSPSNPETDT EIKRAAYARA GLPEYWIVRP AERDVLVCTR PDSVVGDFLE VFTIAPDGTL
LSPTLPFRAQ VAGFFAGSPD ETL