Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2784 |
Symbol | |
ID | 5540270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3600697 |
End bp | 3601308 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640894910 |
Product | hypothetical protein |
Protein accession | YP_001432873 |
Protein GI | 156742744 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCG TCACACCATT TCCCGCTGTG CCGTCGCTAC GCTCAATCGA TACCGGCTGG AACTATGAGC GCTGGTCTGC TCTACCAGAT GATGGCAACC GGTATGAAGT CATCGACGGA GTCCTGTTTG TGACTCCTGC GCCGAGTTTT TTTCACCAAT GGATCGTTCG CCAGATCGTG CTGCTGCTGG TGGAGCAGAT TGACCGTCTA GGCATTGGTC TGACCGCATG GGCGCCGATT GGTGTGCGTA TGCCAGGGTG TGATCCGGTG CAACCCGACA TTGTCGTTGT GCGCAATGAG GATCGCAGCA TGATCTATGA TCGCCGCATC AATGGCGTGC CTGCCTTAAT CGTTGAGGTG TTGTCGCCAT CCAATCCCGA GACCGATACA GAAATCAAAC GTGCAGCATA TGCGCGTGCC GGGTTGCCGG AGTACTGGAT CGTGCGCCCG GCTGAGCGCG ATGTCCTGGT ATGCACCCGT CCCGATTCGG TTGTTGGCGA TTTCCTCGAA GTCTTCACCA TTGCCCCTGA TGGCACGCTT TTGTCACCGA CACTTCCATT CCGCGCCCAG GTCGCCGGCT TCTTCGCAGG TTCGCCGGAC GAAACGCTTT AG
|
Protein sequence | MTTVTPFPAV PSLRSIDTGW NYERWSALPD DGNRYEVIDG VLFVTPAPSF FHQWIVRQIV LLLVEQIDRL GIGLTAWAPI GVRMPGCDPV QPDIVVVRNE DRSMIYDRRI NGVPALIVEV LSPSNPETDT EIKRAAYARA GLPEYWIVRP AERDVLVCTR PDSVVGDFLE VFTIAPDGTL LSPTLPFRAQ VAGFFAGSPD ETL
|
| |