| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1836 |
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| Symbol | |
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| ID | 5539314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2344995 |
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| End bp | 2346233 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893974 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001431945 |
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| Protein GI | 156741816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCG CGCTCGCCGT TTTTGTCTTT TTTGGCATCG GCTACTTCCT CTCCAATTTC
TTTCGCGCCG CTAACGCCGT CATCTCCGGC GATCTGATGC GTGACCTGGG GTTAAGCGCC
GCCGATCTCG GCTTGATGAC CAGCCTGTTC TACGCTGGCT TCGCTGCGGT GCAGTTGCCG
CTCGGTGTTG CGCTTGATCG TATCGGTCCA CGCTTCGCTG TGCCCGCCCT GATGTCGATG
ACGGTCGTCG GATGCCTGTT GTTCGCCACG GCAACGGCGT TGCCGCAGGT CGCCGTGGGG
CGCACCCTGA TCGGCATTGG CATGGCAGGC AATCTGATGG GTGCAGTCAA GGCATTCAGC
GCCTGGTTCC CGCCGCAGCG TGTGGCGACA TTCACCAGTC TGATGGTCGG CATTGGAGCG
CTGGGGGCGC TGGTGGCGGC GACGCCGCTT GCCTGGCTGA ACCAGCAGTT CGGCTGGCGC
GACGTCTTTG TGGGTAGCGC TGGTGTGACC CTGCTGAGTG CAGGGGGAAT CGTGCTCGGT
ACGCGCAACG CGCCAGCTGG CGTGCTCTGG CGCGCCACGT CCGATGTGCC CGACGCCGGG
TTTGCCTGGA TTTTTCGCAA CCCGCACTTT TGGCGCATTG CACCCCTCAA TCTGACGTTG
CTCGGCACAA CGCTCGCCGT TCAGACTCTG TGGGCAGGCC CGTATCTCTT CGATACGTTG
CGCCTGTCAC CAGTTGAAGC CGGCAACCTG ATCCTGATCA TCAGTGCAGG CGTAGCAGCC
GGTTATGGCA GTTGCGGCGC GCTGGCAGAC AGATTCGGCG CGCGGCGGGT GATGACGGTG
AGTACGCTTG TGTTTCTGGC AGCGCAGACG CCGCTTCTCT TGCCTGTGCC GTTACCGACG
ATAGCGCTGG CAATCACATT TTTTCTGTTT GGCTTCAGTG GCGCATTCAG CCTGCTGACG
CTAGCGCAGG TGCGCGAACT GTTTCCGCCA TATATGGGCG GGCGCGCCGT CACCGCTGTC
AACCTGTTTG GCTTTGGCGG CGCGACGGCG ATCCAGTGGG GCATGGGCGT GATCATCAGC
GCATTCGTGC AGAACGATGG TGGTCGTTAT CCAGTCCAGG CATACATCAC AGCATTTGGA
ATGGCGCTCG CACTCAATGT CGCTTCGCTC GTCTGGTATC TGACGCCGGT TTCGTCAGGG
TCGGAGAAGA GGGCGAGAGC AGGTGGGGTT GAAGGGTGA
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| Protein sequence | MNRALAVFVF FGIGYFLSNF FRAANAVISG DLMRDLGLSA ADLGLMTSLF YAGFAAVQLP
LGVALDRIGP RFAVPALMSM TVVGCLLFAT ATALPQVAVG RTLIGIGMAG NLMGAVKAFS
AWFPPQRVAT FTSLMVGIGA LGALVAATPL AWLNQQFGWR DVFVGSAGVT LLSAGGIVLG
TRNAPAGVLW RATSDVPDAG FAWIFRNPHF WRIAPLNLTL LGTTLAVQTL WAGPYLFDTL
RLSPVEAGNL ILIISAGVAA GYGSCGALAD RFGARRVMTV STLVFLAAQT PLLLPVPLPT
IALAITFFLF GFSGAFSLLT LAQVRELFPP YMGGRAVTAV NLFGFGGATA IQWGMGVIIS
AFVQNDGGRY PVQAYITAFG MALALNVASL VWYLTPVSSG SEKRARAGGV EG
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