| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1781 |
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| Symbol | |
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| ID | 5539259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2287700 |
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| End bp | 2288368 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893920 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001431891 |
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| Protein GI | 156741762 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.08127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGCGCC TCAACGGAAA ACCCGAGTTT GCCGTGATCG GTCTTGGGCG ATTCGGCAGC
AGTCTGGCAT TGACGCTTGC CGAACGCGGG TTCAGCGTTC TGGGGATCGA CCGCGACCGC
GCAATCGTCC AATCACTTGC CGATCGTTTG ACCCAAACCG TTGCGCTTGA CTCGACCGAT
GAGCATGCGT TGCGCGCCGT TGATATTCCT TCCTTCGATA CCGTTGTCAT CGCTATCGGA
TCGAACTTCG AGGCGAACCT GCTGACGACC GTGGCGGTCA AATCTCTGGG TGTGCCCCAC
GTCATCTGCA AAGCGACGAC CGATCGCCAA CGCACCATCC TGCTGCGGGT CGGCGCCGAC
CGCGTCATTC TGCCGGAGCA CGAAGCTGGC TGCCGTCTGG CGCAGGAACT CGCCGCGCCG
GGCATGGTCG ACCAGATTGC GCTGGGTGTC GAACACAGCA TTACCGAATT GCGCGTCCCG
TCGTCGTTCG TCGGCCACAC ATTGCGCGAA TGTGATCTAC GTCGCCGGTA CGGGGTAACG
GTTCTGGCAG TCAAACGCGG CGAGCATCTG ACGGTCTTTC CGGCGCCGGA TTTTACCTTT
GCGCATGGCG ACCTGCTAGC GGTCATCGGT GAAAATCAGA GCGTTGCACG GATTGCCGAG
CTGAAATGA
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| Protein sequence | MPRLNGKPEF AVIGLGRFGS SLALTLAERG FSVLGIDRDR AIVQSLADRL TQTVALDSTD
EHALRAVDIP SFDTVVIAIG SNFEANLLTT VAVKSLGVPH VICKATTDRQ RTILLRVGAD
RVILPEHEAG CRLAQELAAP GMVDQIALGV EHSITELRVP SSFVGHTLRE CDLRRRYGVT
VLAVKRGEHL TVFPAPDFTF AHGDLLAVIG ENQSVARIAE LK
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