| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1255 |
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| Symbol | |
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| ID | 5538727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1623081 |
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| End bp | 1624604 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893393 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431370 |
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| Protein GI | 156741241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATA TCCGACTGTT GCTGGCGGTC GCTGCCGGTA AATCGACCGG CGTCGCCAGC
CGCGTTCTGC GGCGCGGCGG CGGTACGACG CTCCCCGGCG TCGTTGCCCG GCGCGTCGAT
CCGCAAGCGC TGCGGAAACT GGCGGTGGCG CTGCCGCAGG GAGTTGTGCT CGTTTCCGGC
ACCAACGGCA AAACGACTAC CACTCGGATG ATTGCGGCGA TGCTGGCGGA CGATGGACGC
GCGCCACTCC ATAATCGCGC CGGCGCGAAC CTGATCAGCG GCGTAACGGC AACGGCGCTA
GCGGGTGTGT CGTTTGGCGG ACGCTCCCCG GCGCGAATCG GTCTGTTCGA AACTGATGAA
GCCGCCTTTC CGGGCATCGC AGCAGAAACC ACACCTCGCC TGGTTGTGCT CCATAATCTG
TTCCGCGATC AACTCGACCG CTACGGCGAA GTGGATACCG TAGCGAAGGG GTGGCGGTCA
GCGCTCGAAC GCCTTCCCGC CACGACAACC GTCTTGCTCA ATGCTGATGA TCCGGCGGTC
GCGGCGCTTG GAGAGGGACT ATCCGCCAAA GTGCGCTTCT ATGGACTCAA TGATCGACGC
TACGCATCGG GGGCGGCGGC GCAGATCGGC GATGCCCGGT TTTGCCGTCG CTGCGGTGCG
CCATACCGCT ACACGGCGCT CTTCTACGCG CACGTCGGGC ATTACCGCTG CGATAGGTGC
AGCGCGGCGC GCCCAACACC CGACTATGCT CTGGAACGGT TGGACCTCCA TGGTGTGAAA
GAGTCCATGC TCTGCCTGAC GTTTCCGGGA GGTGCGATGG AACTCCATCT GCCTCTTCCA
GGTTTGTACA ACGCGATCAA CGCGCTGGCA GCGATTGCGG CATGTCTGGA ACTTGGCGTT
CCGGCGCCAC GTATTCGCGC GACGCTCGAA CATTTCGACG CTGCTTTTGG GCGTATCGAA
CGGGTTGATG CGGGCGGACG CCCGTTGCTG ATCGCCCTGA TCAAAAACCC TGTTGGCGCC
ACCGAAACCA TTCGCATGCT GACGGATGCG TTGAATGTTG AACGTTCAAC GCATGTCGCA
ACGTTGCAGA GCAACGCAGC GCAAGCGGCG GAGACGTTGC AGGGCGACGC AGCATCAGCA
GAAAGGTCGC GGTGCAATGT CTCTACCAAT AACCTTCATC CTTCAACCCT GCTTCACCTT
CTTATCCTGA TCAATGATCG CCATGCTGAT GGAACGGATG TTTCGTGGCT ATGGGACGCG
GAATTCGAGC GCCTGGCGGG ACATGTGGCG CGCGCGACCA TCGGCGGAAC GCGCGCGGCA
GATATGGCGG TGCGGCTGAA ATATGCCGGG GTTGAGTCGG AATGTATCAG CGTCGTGGAT
GACCCGGCAG ACGCGCTGGA CGCGGCGCTC GAACGATTGC CTGCCAGCGC AACGCTCTAT
GCGCTGCCAA CGTATACTGC TATGCTCGAC CTGCGCGCTG AGTTGGTGCG CCGCCGGTGG
GCGCGACCGT TCTGGGAGGA TTAG
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| Protein sequence | MIDIRLLLAV AAGKSTGVAS RVLRRGGGTT LPGVVARRVD PQALRKLAVA LPQGVVLVSG
TNGKTTTTRM IAAMLADDGR APLHNRAGAN LISGVTATAL AGVSFGGRSP ARIGLFETDE
AAFPGIAAET TPRLVVLHNL FRDQLDRYGE VDTVAKGWRS ALERLPATTT VLLNADDPAV
AALGEGLSAK VRFYGLNDRR YASGAAAQIG DARFCRRCGA PYRYTALFYA HVGHYRCDRC
SAARPTPDYA LERLDLHGVK ESMLCLTFPG GAMELHLPLP GLYNAINALA AIAACLELGV
PAPRIRATLE HFDAAFGRIE RVDAGGRPLL IALIKNPVGA TETIRMLTDA LNVERSTHVA
TLQSNAAQAA ETLQGDAASA ERSRCNVSTN NLHPSTLLHL LILINDRHAD GTDVSWLWDA
EFERLAGHVA RATIGGTRAA DMAVRLKYAG VESECISVVD DPADALDAAL ERLPASATLY
ALPTYTAMLD LRAELVRRRW ARPFWED
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