Gene Rcas_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0797 
Symbol 
ID5538263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1041721 
End bp1042485 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID640892949 
Producthypothetical protein 
Protein accessionYP_001430932 
Protein GI156740803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.530617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.99318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CTGTGACTAT GCCGGAGGTG GACCCCGCCC AACCGCCGCC GCCGGAGTAT 
CTGCCGGATT ATGACCGGTT CATCACCGAG GACGACGCGC CGGTGGACAA CTTCTTCTCC
GAAAAGCAAC AGCGCCTGCT GACCGAGCCG CTCTACAGCG CCGACGTCGC CGCGCGCCTC
GGACGCCCCC TCCTCGCCGC CGCCAATGTC GGCATCTTCT TCGGCGAAGG CGAGCCGGCC
ATCGTCCCCG ACGCCCTGCT CAGCCTGGAC GTGCGCCTCG CCGACGACCT CTGGCCCAAG
CCCAACCGCT CGTATTTCAT CTGGCGCTTC GCCAAGCCGC CCGACGTGGT GGTGGAGATC
GTCTCCAACC GCGAGGGCGG CGAACTCGAC CGCAAACGGA CGCGGTATGT CCAACTCGGC
GTCGGCTACT GCCTCGTCTT CGACCCGCAG CGCCTCCTGG GAACGGAACT GCTGCACTGC
TACGAGTTGC GCGGACGAAC CTACACGCCG TGCGACAGCC CCATCCTGCC CGACGTCGGG
CTGGGGGCGC GCCTGTGGGA CGGGGAGTAC GAAGGAGTGC AGGCGGTCTG GCTGCGCTGG
TGCGACCGGG ACGGCAACCT GATCCCCACC GGGGCGGAAC TGGCGGCGCA GGAGCGCCAG
CGTGCCGAAG TGGAGCGCCA GCGCGCCGAA GCCGAGCGCC AGCGCGCCGA GCGGCTGGCG
GCGCGGTTGC GCGCCCTGGG GATCGACCCC GATGCGGAAG CGTGA
 
Protein sequence
MTTPVTMPEV DPAQPPPPEY LPDYDRFITE DDAPVDNFFS EKQQRLLTEP LYSADVAARL 
GRPLLAAANV GIFFGEGEPA IVPDALLSLD VRLADDLWPK PNRSYFIWRF AKPPDVVVEI
VSNREGGELD RKRTRYVQLG VGYCLVFDPQ RLLGTELLHC YELRGRTYTP CDSPILPDVG
LGARLWDGEY EGVQAVWLRW CDRDGNLIPT GAELAAQERQ RAEVERQRAE AERQRAERLA
ARLRALGIDP DAEA