Gene Rcas_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0489 
Symbol 
ID5537952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp630340 
End bp632340 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content60% 
IMG OID640892651 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_001430637 
Protein GI156740508 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TTGTGGGCAT CGTCAACGTT CAGGGTGATC ACCCGATTAC CGAAGAAATG 
CTGCGCCAGA TGCTGGCGTT GATCCGGCAC CGCGGTCCTG ATCAGTTTGG CATCTATCTC
GACGACCGTG CCGGGTTGGG CAATGCGCGA CTGAGCATCA TCGATCTGAG CGGCGGTCAG
CAACCGATTG CCAGCGAAGA TGAGGGTCTC TGGATCGTCT TCAACGGCGA AATCTTCAAC
TATGTGGAAC TGCGTCCCGA TCTCGAGGCG CGCGGGCACC GCTTCACGAC CAATACCGAT
ACCGAGGTGA TTCTGCACCT GTATGAAGAG TACGGTCCGG CATGCCTTTC CCATCTCAAC
GGGCAGTTTG CGATCGCCAT CTGGGACGCG CACGAACAGA CACTCTTCCT GGCGCGCGAC
CGGGTCGGCA TCCTCCCACT GTTCTATACC ATCGTCGATG GCACGTTGAT CTTCGCGTCG
GAGATCAAGG CAATCATCGC TGATCCGCGC GTGCAACGCG CCATCGACCC CGTGGCGCTG
GAGCAGATTT TCACGTTCTG GGGAACGCTC TCGCCGCGGA CCATTTTTCG TGGCATCGTG
GATCTGCCTC CAGGTCATTA CCTGATTGCG CGACGCGGGC GGATCGATGT TCAACCGTAC
TGGCGGCTGG AGTTCGGCGC GCCAACCGAA GCGCGCCGCG AGGAGGAATA TGTCGAGGAG
TTGCGCGATC TCCTGATCGA CGCCACAACG ATCCGTCTGC GCGCGGATGT GCCGGTCGGG
GCATACCTCA GCGGCGGACT GGACTCCTCG ACAGTTGCAG CAATTGTGCG CCAGTACGCA
GATAATCGCC TCGATACCTT TTCGATTGCC TTCAGCGACC CGGAGTTCGA TGAAAGTCGC
TTCCAGCGCC AGATGGCGCA GTGCCTTGGC ACGAACCATC AGGTAGCGTA TGTGACGCAC
GCCGATATTG GGCGCGTCTT CCCGGAGGTG ATCTGGCACA CGGAAACGCC AATCCTGCGC
ACATCGCCGG CGCCGCTCTT CATTCTCTCG CAACTGGTGC GCGACCATTC CTACCGTGTG
GTGCTGACCG GCGAAGGCGC CGATGAATTT CTGGCAGGCT ACGACATTTT CAAAGAAGCG
AAGGTGCGGC GGTTTTGGGC GCGTCAGCCG TCTTCGCGCC TGCGACCGTT GCTATTGCGG
CGCCTGTATC CCTGGATCGC CGGGTTTGCC GGCAAGAATG TCGCCTATCT GGCGGCGTTC
TTCAGTGAAG GATTGATGGA TACGACCGCG CCAGACTACT CACACCGTCC GCGCTGGCGC
ACCACCAGCC GCACCCGCCG ATTCTTCAGC GACGACGTGC GTCAGGCCGC CGATACGCTG
GCGCAATCCA CGGATCGCGC GCCATACTAC CCGGAAGCGT TCAGTTCGTG GGATCCGCTC
CAGCAGGCGC AGTATCTGGA GATCACCACG TTCCTTTCGC AATACCTCCT CTCTGCCCAG
GGAGACCGGA TGATTATGGC GCACGCGGTT GAGGGGCGCT TTCCCTTCCT CGATCATCGT
GTCATCGAAT TTGCCAGTCG CCTGCCACCG TGCCTGAAAC TGCGCGGTCT CACCGAGAAG
TACATCCTGC GCCGGGTCGG TCGTGCCTGG CTGCCAGACG CCATCTGGCA GCGTCCCAAG
CAACCGTACC GCGCGCCGAT CCATCGCAGT TTCTTCAACG ATGCGCGCCT GGACTATGTT
CAGCATCTCC TCTCGCCGGA TCAGGTCCAG GCGAACGGTC TGTTCAAACC GACGGCGGTG
GCGCACCTGA AGGAGAAAGC ACAGTCCGGC GTCCGCTTGA GTGAAACCGA AGACATGGCG
CTGGTGGGGA TTCTCTCGAC CCAACTGCTG GTCGAGCGGT TCATTCACGA ATTTCGTTTA
CCGCCGCCAA TCTCCGAAGC AGACAGTGTC AGAGTCTGCA TTAGAAACGG CATCACCGTG
GGAGGAACTT ATGGGATTTG A
 
Protein sequence
MCGIVGIVNV QGDHPITEEM LRQMLALIRH RGPDQFGIYL DDRAGLGNAR LSIIDLSGGQ 
QPIASEDEGL WIVFNGEIFN YVELRPDLEA RGHRFTTNTD TEVILHLYEE YGPACLSHLN
GQFAIAIWDA HEQTLFLARD RVGILPLFYT IVDGTLIFAS EIKAIIADPR VQRAIDPVAL
EQIFTFWGTL SPRTIFRGIV DLPPGHYLIA RRGRIDVQPY WRLEFGAPTE ARREEEYVEE
LRDLLIDATT IRLRADVPVG AYLSGGLDSS TVAAIVRQYA DNRLDTFSIA FSDPEFDESR
FQRQMAQCLG TNHQVAYVTH ADIGRVFPEV IWHTETPILR TSPAPLFILS QLVRDHSYRV
VLTGEGADEF LAGYDIFKEA KVRRFWARQP SSRLRPLLLR RLYPWIAGFA GKNVAYLAAF
FSEGLMDTTA PDYSHRPRWR TTSRTRRFFS DDVRQAADTL AQSTDRAPYY PEAFSSWDPL
QQAQYLEITT FLSQYLLSAQ GDRMIMAHAV EGRFPFLDHR VIEFASRLPP CLKLRGLTEK
YILRRVGRAW LPDAIWQRPK QPYRAPIHRS FFNDARLDYV QHLLSPDQVQ ANGLFKPTAV
AHLKEKAQSG VRLSETEDMA LVGILSTQLL VERFIHEFRL PPPISEADSV RVCIRNGITV
GGTYGI