Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0463 |
Symbol | |
ID | 5537926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 590886 |
End bp | 591767 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892626 |
Product | glycosyl transferase family protein |
Protein accession | YP_001430612 |
Protein GI | 156740483 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.580187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC TATCGATTAT TATTGTTAAC TGGAATACGC GCGATATTCT GCTCGATTGC CTCGACACCA TCGTAGCGTA CCCGCCGCAG CGCCCTTACG ATATCTGGGT TGTGGACAAC GCCTCACGTG ATGGGAGCGT CGCAGCCGTG CAGTCGCGCC ATCCATATGC TCATATCATC GCAAATGCAG AGAACCGGGG ATTTGCGGCG GCGAATAATC AGGCAATCGA CGCTTCCTGC GGTGATTACG TTCTCTTACT CAACAGCGAC ACGCTTGTTC GCGCGCAGGC GCTGGAGCGT ATGGCGCACT TCCTGGACAT CCATGCCCGG GTTGGGGTTG TTGGCGCCTG CCTGCTTAAT GCCGATGGAA CGCTCCAACC GTCGTGGTCC GCCTTCCCAT CGTTCTGGGC GGAACTGCTG GGACGCAATG TTCGCGCGCG TCGACCGTAT GGCACGGTTG ATGGCAGCAC GGCGTATGCC GTGGACTGGG TCGGCGGCGC GGCGCTGATG ATTCGTCGTG AAGTCATCGC AAAGATTGGT GCGCTCGACG AGGGGTACTT CATGTACTCG GAAGAGACCG ACTGGTGCTT CAGAGTGCGC AAAGCCGGCT GGGACGTCTG CTACCTGCCG CACGCAACTA TTGTGCATCT TGGCGGTCAG AGCAGCCAGA AGGCGAGCGC GCGTATGAAG GCGGAACTCT ACCGCAGCAA AATACGCTTC TACACAAAGC ATTATGGTCG GCATCAGGCA TATGCGCTGA GCCTGGCATT GCGCGCTGCG TTATACGGCA AGACGCTGAT CAAGAGAGTG AGGGGGCGAG CCGGAGCGGA TTGCGATCTT CATCTCCTTG CTCAAGCATT GAATGTCCCA CGCTGGCACT GA
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Protein sequence | MNTLSIIIVN WNTRDILLDC LDTIVAYPPQ RPYDIWVVDN ASRDGSVAAV QSRHPYAHII ANAENRGFAA ANNQAIDASC GDYVLLLNSD TLVRAQALER MAHFLDIHAR VGVVGACLLN ADGTLQPSWS AFPSFWAELL GRNVRARRPY GTVDGSTAYA VDWVGGAALM IRREVIAKIG ALDEGYFMYS EETDWCFRVR KAGWDVCYLP HATIVHLGGQ SSQKASARMK AELYRSKIRF YTKHYGRHQA YALSLALRAA LYGKTLIKRV RGRAGADCDL HLLAQALNVP RWH
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