Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2858 |
Symbol | |
ID | 1221706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3077050 |
End bp | 3078204 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239260 |
Product | putative zinc protease protein |
Protein accession | NP_520979 |
Protein GI | 17547577 |
COG category | [R] General function prediction only |
COG ID | [COG4324] Predicted aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGCT TTCGTGCGGG GGTGTTGGCG CTGTCCATGG CCGGCGCGGC GTTGCTGACC GGCTGCGATA CGGTCGGCTA TTACTACCAG TCGGTCACCG GGCACCTGTC GCTGATGGCG CAGCGGCAGT CGCTCGATGA AGCCATCGAG AACGCCCGCC AGGCGCATGA CGACCGGCTC GCCCGCCGGC TGGAGGATGC CCGCGCCATC CGCGCCTATG CCTCGCGCGA GCTCGAGCTG CCCGATAACC ACAGCTACCG CGTCTACGCC AACATCAAGC GCCCGTTCGC GGTGTGGAAC GTGTTCGCCG CGCCCGAACT GTCGGTCAAG CTCAAGACGT GGTGCTTCCT GGTGGTCGGC TGCGTGACCT ATCGCGGCTA CTACGACCGC AACGCCGCCC AGGCCTACGC CGACACGCTG CGCGCCCAGG GCTGGGACGT GGACGTGGCG GGCATTCCCG CGTACTCCAC GCTCGGGTAC TTCGACGATC CGCTGCTCAA CACCTTCGTC AACCTGCCGG AGGGCGAGCT GGCGCGGCTG ATCTTCCACG AGCTCGCGCA CCAGGTGGTC TACGCCAAGG GCGATACGGC GTTCAACGAG TCCTTCGCCA CCGCGGTGGA GACCATCGGC GTCGAGCGCT GGCTGGCGGA TGCCGCGACC CCGGAGGTTC GCGCGGAATA CGCCACATAT GACGCCCGGC GCGTACAATT CCGCGCCTTG CTGCTGGACT ACCGCAACCG CCTGGAGGCG CTGTACGCCA GCCCCGTATC CGATGACGAG AAACGTGCCG GCAAACGCGC GCTGTTCGAC AGCCTGCGGG CCGATTACGC CAAGCTCAAG GCCGGCTGGG GCGGCTACGC CGGCTACGAC CGCTGGTTCG CGCAGCCGCT GTCGAATGCG CACCTGGGCG TGGTGGCCAG CTACCTGCAG TGGGTGCCGG CTTTCACGGC GCTGTATCAG CGCGACGGCG GCGACTGGGC GCGCTTCTAT GCCGACGTCA AGGCGATGGC GCGCGCGCCG CAGGCCGAGC GGACCGCCGC GCTGACGGCG CTGGCACCGC CCACTGCACC GGGCGCGGAG ATGTCCCGGG CGGCCAGCAG TGCAGCTTCG GGCACTTCCG GGCGCCCGAG GGATCCGTCT AAGTTATTGT TTTGA
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Protein sequence | MRGFRAGVLA LSMAGAALLT GCDTVGYYYQ SVTGHLSLMA QRQSLDEAIE NARQAHDDRL ARRLEDARAI RAYASRELEL PDNHSYRVYA NIKRPFAVWN VFAAPELSVK LKTWCFLVVG CVTYRGYYDR NAAQAYADTL RAQGWDVDVA GIPAYSTLGY FDDPLLNTFV NLPEGELARL IFHELAHQVV YAKGDTAFNE SFATAVETIG VERWLADAAT PEVRAEYATY DARRVQFRAL LLDYRNRLEA LYASPVSDDE KRAGKRALFD SLRADYAKLK AGWGGYAGYD RWFAQPLSNA HLGVVASYLQ WVPAFTALYQ RDGGDWARFY ADVKAMARAP QAERTAALTA LAPPTAPGAE MSRAASSAAS GTSGRPRDPS KLLF
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