| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2538 |
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| Symbol | |
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| ID | 1221385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2746191 |
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| End bp | 2747267 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238939 |
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| Product | lipoprotein transmembrane |
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| Protein accession | NP_520659 |
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| Protein GI | 17547257 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.405057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTGCA ATAGCGGCCA TCCCTTGATC CGATCGGCGC CGTGGCGGCG CAAGCACATG
AAGATCCCCT TCCTTTCCCG CATCGACGGC TTCATCCGCG CCATGCTGGT GATGGTCCTG
CTGGCCCTGC TGTTCCCGTC GCTGGGCGCG AGCGCGGGGC CGCTGCACCT CGATATCGTC
ACCGTGCTGG GGGTGTCGCT GGTGTTCTTC CTGCACGGCG CGGCGCTGTC GCGCGAGAAG
ATCGTCGAAG GCGCGCGCAA CTGGCGCCTG CACCTGTTCG TGCAGAGCTG CACGTTCGTC
CTGTTCCCGC TGATCGGCGC GGCGATCCTG GTCGCATGCA AGCCCTTCAT CCCGGCCGAG
CTGCTGCTGG GCGTGTTCTA CCTGTGCGCG CTGCCGTCCA CGGTGTCGTC GTCGGTGGCG
ATGACCGCGA TGGCCAAGGG AAACGTGCCG GCCGCCATCT TCAATGCCAC CATCTCGGGC
CTGATCGGCA TGGTGGCCAC GCCGCTGCTG ATGAGCTTCG TGATCCAGGC CTCCGGCGCG
GAGCTGCCGG TCGGCAAGGC ACTGCTGGGC GTGGCCGAGC AGTTGCTGCT GCCCTTCGTG
CTGGGCCAGC TGCTGCGCCC GGCCATCGGC GGCTTCATCA CGCGGTATAA GGCGATCATC
AACAAGGTCG ATCGCGCGGT GATCCTGCTG ATCGTCTTCA ACTCGTTCGC CGATTCGACA
CATGCGGGCG TGTGGTCGAA GTATCCGTGG GAGACCATCG TCGCCGTGGC GATCATGAGC
GGCGCGCTGC TGTTCGTGGT GCTGGGCGCG ACGACGTGGA TCGCGCGGCG CTTCGGCTTC
GGCCTGGCCG ATGAGATCAC CGCCGTGTTC TGCGGCTCGA AGAAGAGCCT GGCCAACGGC
GTGCCGATGG CGAAGATCCT GTTTGCCGGC AACCCGGCGC TGGGCCTGAT CGTGCTGCCG
ATCATGATCT ATCACCAGCT GCAACTGATC GTCTGCTCGA CGCTGGCGCG CCGGTACGCG
GATCGCATCG CGCACGCGGA AGACCGGGCC GCCGACCGCG CCGGCCAGCC CGCCTGA
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| Protein sequence | MACNSGHPLI RSAPWRRKHM KIPFLSRIDG FIRAMLVMVL LALLFPSLGA SAGPLHLDIV
TVLGVSLVFF LHGAALSREK IVEGARNWRL HLFVQSCTFV LFPLIGAAIL VACKPFIPAE
LLLGVFYLCA LPSTVSSSVA MTAMAKGNVP AAIFNATISG LIGMVATPLL MSFVIQASGA
ELPVGKALLG VAEQLLLPFV LGQLLRPAIG GFITRYKAII NKVDRAVILL IVFNSFADST
HAGVWSKYPW ETIVAVAIMS GALLFVVLGA TTWIARRFGF GLADEITAVF CGSKKSLANG
VPMAKILFAG NPALGLIVLP IMIYHQLQLI VCSTLARRYA DRIAHAEDRA ADRAGQPA
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