| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0594 |
|---|
| Symbol | |
|---|
| ID | 3718008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2334500 |
|---|
| End bp | 2336005 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640071805 |
|---|
| Product | putative choline sulfatase |
|---|
| Protein accession | YP_353669 |
|---|
| Protein GI | 77464165 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | [TIGR03417] choline-sulfatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CCAACATCCT CATCCTGATG GTCGATCAGC TGAACGGAAC GCTGTTTCCC
GACGGGCCGG CCGACTGGCT GCACGCGCCG AACCTGAAGC GGCTCGCGGA CCGCTCTCTC
CGGTTTTCGA ACAGCTATAC GGCCAGCCCC CTCTGCGCCC CGGCGCGGGC CTCCTTCATG
TCGGGTCAGC TGCCCTCGCG CACCCGGGTC TATGACAATG CGGCCGAGTT CGCCTCGGAC
ATTCCCACCT TCGCACATCA TCTGCGGCGC GCCGGCTATC AGACCACGCT CTCGGGCAAG
ATGCATTTCG TGGGGCCCGA CCAGCTGCAC GGGTTCGAGG CGCGGCTGAC GACCGACATC
TATCCCGCCG ACTTCGGCTG GACGCCGGAC TATCGCAAGC CGGGCGAGCG GATCGACTGG
TGGTATCACA ACTTGGGCTC CGTCACCGGC GCGGGCGTGG CCGAGATCAC CAACCAGCTC
GAATATGACG ACGACGTGGC GCATCAGGCG ATCCAGAAGC TCTACGACCT GTCGCGCGGC
GCCGATCCGC GGCCCTGGTG CCTCACGGTC AGCTTCACCC ATCCGCACGA TCCCTTCGTG
GCGCGCCGGA AATACTGGGA CCTCTACGAG GACCATCCAA TGCTCGAGCC GCCCGCCTCC
ATTCCCTACG AAGCCCAGGA CAGCCACTCG CGCCGCCTGA TGGATGCCTG CGATTTCAAG
GCGTTCGACA TCACGCCCGA GCAGGTGCGC CGCGCGCGGC AGGGCTACTT CGCCAATATC
TCCTATGTGG ACGACAAGAT CGGCGAGATC CTCGCCGTAC TCGAGGCCTC GCGTCAGGAG
GCCATCGTCG TCTTCGTCTC GGATCACGGC GAGATGCTGG GCGACCGCGG CCTCTGGTTC
AAGATGAGCT TCTTCGAGGG CTCGGCCAGG GTGCCGCTGA TGATCGCGGC TCCCGGCCTG
CCCGCCGGGC GGATCGCGGC GCCGGTTTCG ACCATCGACG TGACGCCCAC GCTCTGCGCG
CTGGCCGGCA TCGACATGGG CGAGATCGCG CCCTGGACCG ATGGCATCAG TCTGGTCCCG
CTGGCCGAAG GCGAACTGCG TCCCGAGCCC GTGTTCATGG AATATGCGGC CGAGGGTTCG
ATCACGCCGC TGGTGGCGAT CCGCGAGGGG CGCTGGAAAT ATGTCCGCTG TCTCGCAGAT
CCCGAACAGC TGTTCGATAT CGAGGCGGAT CCCGGCGAGC GGACGGATCT GGCGGCCGAT
CCGGCCCATG CCGACACGCT GGCGCGGCTG CGGTCCCTCT CGCAGGCGCG CTGGGATCTC
GCGGCCTTCG ACGCCGCCGT GCGCGAAAGC CAGGCCCGGC GCTGGATCGT CTACGAGGCG
CTGCGGCAGG GCGGCTATTA CCCGTGGGAT TACCAGCCGC TGCAGAAGGC TTCCGAGCGC
TACATGCGCA ACCACATGGA TCTGAATATT CTCGAAGAGA GCAAGCGCTT CCCGCGGGGC
GAATGA
|
|---|
| Protein sequence | MTQPNILILM VDQLNGTLFP DGPADWLHAP NLKRLADRSL RFSNSYTASP LCAPARASFM
SGQLPSRTRV YDNAAEFASD IPTFAHHLRR AGYQTTLSGK MHFVGPDQLH GFEARLTTDI
YPADFGWTPD YRKPGERIDW WYHNLGSVTG AGVAEITNQL EYDDDVAHQA IQKLYDLSRG
ADPRPWCLTV SFTHPHDPFV ARRKYWDLYE DHPMLEPPAS IPYEAQDSHS RRLMDACDFK
AFDITPEQVR RARQGYFANI SYVDDKIGEI LAVLEASRQE AIVVFVSDHG EMLGDRGLWF
KMSFFEGSAR VPLMIAAPGL PAGRIAAPVS TIDVTPTLCA LAGIDMGEIA PWTDGISLVP
LAEGELRPEP VFMEYAAEGS ITPLVAIREG RWKYVRCLAD PEQLFDIEAD PGERTDLAAD
PAHADTLARL RSLSQARWDL AAFDAAVRES QARRWIVYEA LRQGGYYPWD YQPLQKASER
YMRNHMDLNI LEESKRFPRG E
|
|---|
| |