Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3497 |
Symbol | |
ID | 4024011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3887980 |
End bp | 3888846 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637963701 |
Product | urease accessory protein UreF |
Protein accession | YP_570621 |
Protein GI | 91977962 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.977341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCATCA TGGCCACGCT GGTCATGACC ATGCTCATCA TGGCCATGAT CACAGCCAGC ATGATCACGG CCACGATCAC CACGTCCACG ACGAGCATTG CGGCCACGAT CACGCGCACG GCCATGCGCA CAAGCATGAG CACAAGTAGA GCGCCGGAGA CGACCTCGGC CGCGCCGCTG TCGGCGGAGC AAAGCGCGTC GCTGTATCGG CTGATGACCT GGCTGTCGCC GGCGTTTCCG GTCGGCGCGT TTTCCTATTC GAGCGGCCTC GAATGGGCGG TCGAAGCCGG CGATGTCATC GACGCACCGA GCCTGCGTGA CTGGCTCACC GCGATGCTCG AACATGGCGC TGGCTTCTGC GACGGCGTGT TTCTCGCGCA TGCCTATCGC GCTGTCGCGG CCGCCGACGA GACGGCGCTG CGCCACGTCG CCGAACTGGC GACCGCGTTC GTGCCGTCGG CCGAGCGTCA TCTCGAAACC ACCGCGCAGG GCAAGGCCTT CATCGAGATC GTGCGCAACG CCTGGCCGAG CGACGGGCTC GCATGCGCGG TCGACGCCTG CGCCGGTGCG CTGGCCTATC CGGTCGCCGT CGGCCTCGTC AGCGCCACGC ATGGCGTGCC GCTCGCCGCG ACGCTGCACG CCTTCCTGCA TGCGGTGGTG TCGAACTGGA TCTCCGCCGG CGCGCGGCTG GTCCCGCTCG GCCAGACCGA CAGCCAGCGC GTGCTCGCGG CATTGGAGCC CGCGGTGATC GCCGCCGGCG ACCGCGCACG CGAGGCGTCA CTTGATGATC TCGGCAGCGC CACCTTCCGC GCCGACCTCG CCAGCCTGCG CCACGAGACG CAGTACACGC GGCTGTTCCG GTCGTAG
|
Protein sequence | MIIMATLVMT MLIMAMITAS MITATITTST TSIAATITRT AMRTSMSTSR APETTSAAPL SAEQSASLYR LMTWLSPAFP VGAFSYSSGL EWAVEAGDVI DAPSLRDWLT AMLEHGAGFC DGVFLAHAYR AVAAADETAL RHVAELATAF VPSAERHLET TAQGKAFIEI VRNAWPSDGL ACAVDACAGA LAYPVAVGLV SATHGVPLAA TLHAFLHAVV SNWISAGARL VPLGQTDSQR VLAALEPAVI AAGDRAREAS LDDLGSATFR ADLASLRHET QYTRLFRS
|
| |