Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0157 |
Symbol | |
ID | 4020613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 177483 |
End bp | 179273 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960334 |
Product | potassium/proton antiporter |
Protein accession | YP_567298 |
Protein GI | 91974639 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCTC TCGACACGGT CAGCATAACG ATCCTGCTCG GCGCGATCCT GGTGATGGCG GGCATCCTGT CGAGCCTGCT GGCGCTGCGT TTCGGCGCGC CGTTGCTGCT GGTGTTCCTC GTGCTCGGTA TGCTGGCCGG CGAGGCCGGG CCCGGCGGTC TGAGGTTCGA CGATCTCAGC ACCACCTATC TGGTCGGCTC GGTCGCGCTG GCGCTGATCC TGTTCGACGG CGGGCTGCGC ACGCGATTCC AGACCATCAA GGCGGTGCTG GCGCCATCGA TGGGGCTGGC GACGGCCGGC GTGCTGCTGA CGGCCCTGAT AACCGCGCCG GTCGCCCATT ACGCGCTCGA TCTGAGCTGG ACCGAGGCGC TGCTCGCCGG CGCCGTCGTG GCCTCGACCG ACGCCGCCGC GGTGTTTCTG CTGGTGCATT CGCAGGGGCT GCGGCTGCGG CCCCGCGTCG GCGCGACGCT GGAGGTTGAA TCCGGCACCA ACGATCCGTT CGCGGTGTTT CTGACGCTGA TGCTGGTCGA GTTGATCACC CGCGGCGGAA GCACGATCTG GTACGTGATC TTCGAGTTCG TCCGCGAAGC CGCGCTCGGC ACGGTGATCG GCGTGGTCGG CGGCCGCGCC GTGGTGATGG CGCTGAACCG GGTGGCGCTG CCGCAGGGGC TGCACGCGCC GTTCGTCACC ACCGCCGCGC TGGTGGTGTT CGGCGCCGCG CAGATGCTGC ATGCATCGGG CTTTCTCGCG GTCTATCTCG CCGGCATGAT CATCGGCAAT CAGCCGACCC GCGCGCACAA TTCCGTGGTG GCTTTTCTCG ACGCCGCGAC CTGGCTGGCG CAGATCGTGA TGTTCGTCCT GCTCGGCCTG CTGGTGTCGC CGCAGCGGCT GATGATGAGC ATCGGGCCGG CGGTGCTGGT GGCGCTGGCG CTGATGCTGG TGGCGCGGCC GGTCGCCGTG TTCCTGTGTC TGGCGCCGTT CCGCTTCAAC TGGCGGGAAC GCCTGTTCAT CGCCTGGGTC GGACTGCGCG GCGCGGTCGC GATCTTCCTC GCCTCGATCC CGATGATGGT CGGGCTGCCG AAGGCGCATC TGTATTTCGA CGTCGCCTTC GTGGTGGTGA TCATCTCGCT GCTGCTGCAG GGCTGGACGC TGGGGCCGGC GGCGCGGAAG CTGCACATCG CGCTGCAACG CACCGACCGC GGCCCGCGCC GTATCGAACT CGATCTGCCC GGCCAGCTCG AGCAACAGCT GGTCGGCTAT GCGGTGCGGC CGAAAAGCCT GTTCCTGCGC CGCGGCCTGG TCCCGTCATG GTCGAAGCCG ACGCTGGTGA TCCGCGACGA GCGCATCCTG ACGCCGGAGG AGGCCGATCC GGTCGCGGCC GGCGATTACG TCTATCTGCT GGCCCCGCCG GAAAAGGCTG AGGCGCTCGA CCGCTTCTTC GTCGACATGC CGCCCTCGAC TGCGCCCGAT CCGCATCTGC TCGGCGATTT CGTCGTGCCC GGCGAGACCT CGCTCGGCGA TCTCGCCGCC GCCTATGGGG TGAGCGTGCA GGCCGGCGAA GAAGCGCTGA CGCTGGCGGA TTATTTCGAC ATCCATCTCG ACCGCGCGCC GACCGTCAAT GCCACGGTGG CGCTGGATTC GATCGTGCTG GTGGCGCGCA GCCTCGGCGG CGGCCGGGTC AATGTGGTCG GCCTGCGGCT GCCGGAAGAC GACGACGCGC CGCCGCCGAC CCGCGTTCAA AAGGCCAGGC GCAAGCTGTC CAAGGTGTGG TCGACGCTGT CGGGGGTTTG A
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Protein sequence | MDSLDTVSIT ILLGAILVMA GILSSLLALR FGAPLLLVFL VLGMLAGEAG PGGLRFDDLS TTYLVGSVAL ALILFDGGLR TRFQTIKAVL APSMGLATAG VLLTALITAP VAHYALDLSW TEALLAGAVV ASTDAAAVFL LVHSQGLRLR PRVGATLEVE SGTNDPFAVF LTLMLVELIT RGGSTIWYVI FEFVREAALG TVIGVVGGRA VVMALNRVAL PQGLHAPFVT TAALVVFGAA QMLHASGFLA VYLAGMIIGN QPTRAHNSVV AFLDAATWLA QIVMFVLLGL LVSPQRLMMS IGPAVLVALA LMLVARPVAV FLCLAPFRFN WRERLFIAWV GLRGAVAIFL ASIPMMVGLP KAHLYFDVAF VVVIISLLLQ GWTLGPAARK LHIALQRTDR GPRRIELDLP GQLEQQLVGY AVRPKSLFLR RGLVPSWSKP TLVIRDERIL TPEEADPVAA GDYVYLLAPP EKAEALDRFF VDMPPSTAPD PHLLGDFVVP GETSLGDLAA AYGVSVQAGE EALTLADYFD IHLDRAPTVN ATVALDSIVL VARSLGGGRV NVVGLRLPED DDAPPPTRVQ KARRKLSKVW STLSGV
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