Gene RPC_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1959 
Symbol 
ID3973632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2131409 
End bp2132035 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID637925070 
Productcobalt transport protein CbiM 
Protein accessionYP_531835 
Protein GI90423465 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG TTGACGGAGC ACTCTCCATG CCGGTCCTGG TGGCCGGATC CGCGCTCGCC 
GTTGCGGGGA TCGGCATCGG CGTCCGCCAG ATGCCGATCG ATAAGATTCC GGCAGCCGGC
GTGCTGAGCG CGACGTTCTT CGTCGCCTCG TTGGTGCATG TCCCGATCGG ACCATCGAGT
GTCCACCTGA TCGTCAACGG TCTGGCCGGG CTGGTGCTCG GCTGGGCTGC CTTTCCGGCG
CTGTTCGTCG CGCTGTTGCT GCAGGCGGTG TTCTTCGGTT TCGGCGGCCT CACGGTGCTG
GGGGTGAACA CCGTCGATAT CGCTCTGCCG GCGGTGATCG TCTACTACGT CTGCCGGCCC
GGCATCGTCC ACGCGCAGCC AGCGGTGGCG GCGATCTGGG GCGCGATCGG CGGCGCGCTG
GCGATCGCTC TGACGACCGT CTGTGTCGGC ATCGCGCTGG CTTTCTCCGG CGACGAGTTC
GTGCCCGCCG CGAAGCTTGT CTTCATCGCT CATATCCCGG TCATGGCGAT CGAGGCCGTG
CTCACCGCGG CCGCCGTCTA TCTCGTCCGC CGGGTCAAAC CGGAGCTCTT CAACGCCTTC
GCCGCGCCTG TGCTCAAGGG AGCGTGA
 
Protein sequence
MHIVDGALSM PVLVAGSALA VAGIGIGVRQ MPIDKIPAAG VLSATFFVAS LVHVPIGPSS 
VHLIVNGLAG LVLGWAAFPA LFVALLLQAV FFGFGGLTVL GVNTVDIALP AVIVYYVCRP
GIVHAQPAVA AIWGAIGGAL AIALTTVCVG IALAFSGDEF VPAAKLVFIA HIPVMAIEAV
LTAAAVYLVR RVKPELFNAF AAPVLKGA