Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1804 |
Symbol | |
ID | 3972069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1961315 |
End bp | 1961977 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637924917 |
Product | peptidase U35, phage prohead HK97 |
Protein accession | YP_531682 |
Protein GI | 90423312 |
COG category | [R] General function prediction only |
COG ID | [COG3740] Phage head maturation protease |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.409036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.116646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCCC CATTGCTTAC GCCATCGCGC CTCGCGCTGT CGGAAGACGG CAGCATCGAA GGCTATGCCA GCCTGTTCGG TGCGGTGGAT CAGGCCCGCG ACATGGTGAT GCCCGGCGCC TTTGCGCAGA CGCTGCGAAG CCGCGGCCTG CGCAAGATCC CGATGCTGTT TCAGCACGAC CCCGCCGAGC CGGTCGGGAT CTGGCTCGAA CTGATCGAGG ATTTTCGCGG GCTGCGGGCG CGCGGAAAAC TGATCCCCGA CGTGGCGCGC GGCCGCGAAT TGCTGGCGCT GCTCCGCGAA GGCGCGATCG ACGGGCTGTC GATCGGCTAT CGCACGGTGC GCGGCGCGAT CGATCCGAAG ACCCGGATCC GCCGGCTGCA TCAGGTCGAC CTCTGGGAGA TTTCCATCGT CACCTTTCCG CTGTTGGCGG GCGCCCGGGT CAACGCGGTG AAGGACGTCG CGCGGCCATC GCCGGCGCGC GACGCCGCCG AGCGGCAATG GCAATTACTG CAGGGGCAGC AACCAGGCGG CGCCGCGGAC GCACCGGCGC GGCCGGCGCG GCGCGGGCGC GTGGCGGGAC TCTCGCTGCG CGCCCGCGCC GATCGCAAAC AGGCGCTGCG CGGCGTGGCG CGCGCACCGA TCGCTCTCAG TCGGCTGCGG TAG
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Protein sequence | MHAPLLTPSR LALSEDGSIE GYASLFGAVD QARDMVMPGA FAQTLRSRGL RKIPMLFQHD PAEPVGIWLE LIEDFRGLRA RGKLIPDVAR GRELLALLRE GAIDGLSIGY RTVRGAIDPK TRIRRLHQVD LWEISIVTFP LLAGARVNAV KDVARPSPAR DAAERQWQLL QGQQPGGAAD APARPARRGR VAGLSLRARA DRKQALRGVA RAPIALSRLR
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