| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1245 |
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| Symbol | |
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| ID | 3972038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1359263 |
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| End bp | 1360492 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924355 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit-like |
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| Protein accession | YP_531126 |
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| Protein GI | 90422756 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.491733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000241639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAGATC TGGCCGATCC AGTTCCCGCG GTGTGGACCC CGCCTCTGGC CGAGCCGGTG
GCGCGCGAGT TGTGCACCGA TTGCGGGGTG TCGCGCACCA GCGATCCCAA GCAATGCGGC
CAGGCCTGCC AGTTCATCAA ACCGGACTAT CCGGCGATGG AATTGCGCGT CCACGGCCGG
GTGCGCGATC CCGCCAAGCC CGACGAAGCT TTCTTCGGCC CGTTCCGCCG CATGGTGCGC
GCGGCGATGA AACAGCCGCG GCAGGGCGCG CAATGGACCG GCATCACCAC AATGATCGGC
GAGCGGCTGT TGCAGACCGG CGCGGTCGAC GCGGTGCTGA CCATGGCGCA GGACCCCGAC
GACAAATGGA AGCCGATGCC GGTGATCGTC ACCAAAGCGG AGGGCATGAA GGCCTGCCGC
GGCATGCGGA TGGGCTACGC GCCACTGTTG TCGCTGCTGG AGCCGGCGCG CGACGCCGGC
CACAAGCGGA TCGCGGTGAT CGGGATTCCC TGCCAGATCT ACGCGCTGCG GCAACTCGAA
CAGAAACTCG GCTTCGAAAA GCTCTACGCG ATCGGCACGC CGTGTTCCGA CAATACCACG
ACGGAGAGCT TCCACCAGTT CCTCGATCTG CTGTCGGACA AGCCCGACAG CATCACCTAT
CTGGAATTTC GCGCCGACTA TCATGTCGAG CTGCGCTTCG ATGACGGAAG GGTGAAGGAG
ATTCCGTTCC TGCTGCTGCC GATCTCCAAG CTGCCGCCGG ATTTCTTTCC GATGACCTGC
CGCACCTGCG TCGACTACAC CAATACGCTG GCGGACATCA CCGTCGGCTA TATGGGCGGC
CAGGGCGAAC AGTGGCTGCT GATCCGCAAC GAACGCGGCG AGGAATTGCT GCGCGTGCTT
GGCGACGAGG TGAGGCTCAG CGAACCCGGC AGCGCCGGCA AGCGCACAGC CCCGGTGAAG
GGCTTCATGA AGAACGTCGA ACTCGCCGCT GGCGGCCTTC CGGTGCGCGG CATGCCGAAC
TGGCTGCGCC CGTTGATGGG CTGGCTGATG CCCAAAGTGG GTCCGCGCGG GCTGGAATTC
GCCCGCACCC GGGTCGAGAT GAAGGCGATC GAGAGCGTGC TGCATCTGCG CCGGCAATAT
CCGCAACGCA TCAAGAACAT GGTACCGGCG CACGTCTGGG CGCTGGTAAA ACCATACGGT
ATCGAGCCGC AAGACGGCGA GCGCAAGTAA
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| Protein sequence | MADLADPVPA VWTPPLAEPV ARELCTDCGV SRTSDPKQCG QACQFIKPDY PAMELRVHGR
VRDPAKPDEA FFGPFRRMVR AAMKQPRQGA QWTGITTMIG ERLLQTGAVD AVLTMAQDPD
DKWKPMPVIV TKAEGMKACR GMRMGYAPLL SLLEPARDAG HKRIAVIGIP CQIYALRQLE
QKLGFEKLYA IGTPCSDNTT TESFHQFLDL LSDKPDSITY LEFRADYHVE LRFDDGRVKE
IPFLLLPISK LPPDFFPMTC RTCVDYTNTL ADITVGYMGG QGEQWLLIRN ERGEELLRVL
GDEVRLSEPG SAGKRTAPVK GFMKNVELAA GGLPVRGMPN WLRPLMGWLM PKVGPRGLEF
ARTRVEMKAI ESVLHLRRQY PQRIKNMVPA HVWALVKPYG IEPQDGERK
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