Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1240 |
Symbol | |
ID | 3972033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1355294 |
End bp | 1356748 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924350 |
Product | PUCC protein |
Protein accession | YP_531121 |
Protein GI | 90422751 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000359132 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000283623 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAACCCTG TCAGTCAAAA AGCGATGAAG GCCTGGATAT CGTTGGGGAC GCGCTTCCTG CCGTTCGCGG ATGCGGCGAC CCCGGACTTG CCGCTGTCGC GGCTGCTGCG GCTCTCCCTG TTTCAAGTCT CGGTCGGAAT GTCCCTGGTG CTGCTGGTCG GCACGTTGAA CCGGGTGATG ATCGTCGAGT TAAACGTGCC GGCGTCGATC GTCGGCATCA TGATTTCGCT GCCGCTGATC TTTGCGCCGT TTCGGGCGCT GATCGGCTTT CGCTCCGACG TCCATAAGTC CGTGCTCGGC TGGAAGCGGG TGCCGTTCCT CTACAAGGGC ACCATGGTGC AGTTCGGCGG GCTGGCGATC CTGCCGTTCG CGCTGTTGGT GCTGTCGGGC GGCGGCGAAG CCGGCCATGC CCCGGTGTGG ATCGGGCAGG CCGCCGCGGC GATCGCCTTC CTGCTGATCG GCGCCGGCGT GCACACCACC CAGACCGTCG GGCTCGCGCT CGCCACCGAT CTGGCGGCGC CGGAATCGCG GCCCAAGGTC GTCGGCCTGA TGTATGTCAT GCTGCTGTTC GGCATGATCG CCAGCGCTTT CATCTTCGGC GCGCTGCTGG CGGATTTCTC GCCCGGCCGT CTGATCCAGG TGATCCAGGG CGCGGCGGTG GTCACCATCG TGCTGAACGG CATCGCGGTC TGGAAGCAGG AAACCCGGCG CTCCGGCGCC GCCGCGCAGG CCGCGCAGCA GCCGCGCACG CCTGGCTTCC GCGAAACCTG GGACGCCTTC ATCGCCGGCG ACAACGCGCT GCGCCGATTG GTTGCCGTCG GCCTCGGCAC CATGGCGTTC AGCATGGAAG ACGTGCTGCT GGAGCCGTTC GGCGGCCAAA TTCTTCATCT CGCGGTGGGC GACACCACCA AGCTCACCGC GGCGCTGGCG CTCGGCGGCC TGTTCGGCTT CGCTCTGGCC TCGCGCGTGC TCAGCCGCGG CGCCGATCCG TTCCGGATGG CGAGCTATGG CGCCCTGGTC GGCATTCCGG CGTTTCTCGC GGTGATCTTC GCCGCCCCCT TGATGTCAGC CTTGCTGTTC GGCGCCGGCA CCTTCCTGAT CGGCTTCGGC GCCGGCTTGT TCGGTCACGG CACGTTGACC GCGACCATGA ATGCCGCGCC GAAGCATCAG GCCGGCCTGG CGCTCGGCGC CTGGGGCGCG GTGCAGGCCT CGGCCGCCGG CATTGCGATC GCGCTCGGCG GCGTGCTGCG AGATCTCGTC GATGCGATCG CACCCCACAC CTCGCTTGGC GCCGCCGCGG GCTATGATTT CGTCTATTGC CTCGAAATCG TTCTGCTGTT GGCGACGCTC ATCATCATGG TCCCGCTCAT TCGACAACCC GGAGCCTATG CCGGAGCGGG GCAGCTTCTG ACACGGCCAC CGATCGGCCT TGAGACTGAA ACGGAGAAGT CATGA
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Protein sequence | MNPVSQKAMK AWISLGTRFL PFADAATPDL PLSRLLRLSL FQVSVGMSLV LLVGTLNRVM IVELNVPASI VGIMISLPLI FAPFRALIGF RSDVHKSVLG WKRVPFLYKG TMVQFGGLAI LPFALLVLSG GGEAGHAPVW IGQAAAAIAF LLIGAGVHTT QTVGLALATD LAAPESRPKV VGLMYVMLLF GMIASAFIFG ALLADFSPGR LIQVIQGAAV VTIVLNGIAV WKQETRRSGA AAQAAQQPRT PGFRETWDAF IAGDNALRRL VAVGLGTMAF SMEDVLLEPF GGQILHLAVG DTTKLTAALA LGGLFGFALA SRVLSRGADP FRMASYGALV GIPAFLAVIF AAPLMSALLF GAGTFLIGFG AGLFGHGTLT ATMNAAPKHQ AGLALGAWGA VQASAAGIAI ALGGVLRDLV DAIAPHTSLG AAAGYDFVYC LEIVLLLATL IIMVPLIRQP GAYAGAGQLL TRPPIGLETE TEKS
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