Gene RPC_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0860 
Symbol 
ID3969818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp948457 
End bp948873 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID637923976 
Producthypothetical protein 
Protein accessionYP_530749 
Protein GI90422379 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AGAAAGCGGG CCGTCCGGTC CCCAAGCCGT CCACCTATGT CGACACCCAG 
GCGTTCTGGG ACGGCGCCAA GCAGGGCAAG CTGGTCTTGC AATATTGCAA GGACACCGGG
CAATTCCAGC ACTATCCGCG GCCGGTCTCG ATCTTCACCG GTAGCCGCAA CCTGGAATGG
CGCGAGGTCT CCGGCAAGGG CACGGTCTAC GCCTGCACGG TGATCCGGGT GCCGGGTCCC
GGCCTCGACG GCCGGCTGCC GTTGTCGGTG GCGACCGTCG AACTCGACGA GGGCGTGCGG
ATTCTCGGCA ACGTGCTGGG CAGCGATCCC GACAAGGTGG CGATCGGCCA GCGCGTCGAA
GTGACCTGGG ATCATCTCAG CAACGACGTG CAATATCCCG CCTTCAAACT GGTCTAG
 
Protein sequence
MAEEKAGRPV PKPSTYVDTQ AFWDGAKQGK LVLQYCKDTG QFQHYPRPVS IFTGSRNLEW 
REVSGKGTVY ACTVIRVPGP GLDGRLPLSV ATVELDEGVR ILGNVLGSDP DKVAIGQRVE
VTWDHLSNDV QYPAFKLV