Gene RPB_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2516 
Symbol 
ID3910305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2875973 
End bp2876470 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID637884415 
ProductMOSC 
Protein accessionYP_486132 
Protein GI86749636 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.406281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.326487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCT TCGCACCCGA TACGCCGCTC GGCCGGCTGA TGACCGCACC GATGCGGCCG 
GGGCGGCTCG ACTGGATCGG ACTGCGTCCG GCAAGACGTG CAGCGGTGCT GGTCGCCGAG
CAGGCGACGC TGATCGCCGG CCGCGGCATC GACGGCGATC GCTATCGCAC CAGCACCAAT
GGCGCGCGGC AGGTGACGCT GGTCGCCGCC GAAGATCTCG TCGCCATCGC CGCCTTCCTC
GGCCGCGACG ATGTTGCGCC CGAATTGCTG CGTCGAAATT TCGTGATCCG GGGCGTCAAT
CTCGTGGCGC TGAAAGGCCA GCGGTTTCGA ATCGGCGCGG CGCTGCTCGA AGGGGCGGGG
GACTGCGCGC CGTGCAGCCG GATGGAAGAG ACGCTGGGGC CGGGCGGTTA CAACGCCGTG
CGCGGTCGCG GCGGACTCAC CGCCCGCGTG ATCGAAGGTG GCGTCGTTCG CATCGGCGAT
GCGCTCGAAC GGGTGTAA
 
Protein sequence
MKPFAPDTPL GRLMTAPMRP GRLDWIGLRP ARRAAVLVAE QATLIAGRGI DGDRYRTSTN 
GARQVTLVAA EDLVAIAAFL GRDDVAPELL RRNFVIRGVN LVALKGQRFR IGAALLEGAG
DCAPCSRMEE TLGPGGYNAV RGRGGLTARV IEGGVVRIGD ALERV