Gene RPB_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2311 
SymbolrplR 
ID3908942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2661855 
End bp2662217 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID637884208 
Product50S ribosomal protein L18 
Protein accessionYP_485927 
Protein GI86749431 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0992173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.451377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGT TGAATGTCAC GAATGCCCGG CGCAAGACTC GGGTCCGGAT CGCGCTGCGG 
CGCACCGCCA ACGGCCGTCC GCGGCTGTCG GTGTTCCGCT CGTCGAAGCA TATTTACGCC
CAGGTGATCG ACGATCTGAA GGGCGAGACC CTGGCCTCGG CGTCGTCGCT GGAGAAGTCG
ATGCGCGAAG CCGGCAACAC CGGCGCCAAC ATCGACGCGG CGAAGGCGGT CGGCAAGCTG
CTGGCGGAGC GCGCGGTGAA GCAGGGCGTC AAGGAAGTCG TGTTCGACCG CGGCGGCTAT
CTGTATCACG GCCGCGTCAA GGCGCTGGCG GATGCGGCGC GCGAGAGCGG CCTGAGCTTC
TAA
 
Protein sequence
MSKLNVTNAR RKTRVRIALR RTANGRPRLS VFRSSKHIYA QVIDDLKGET LASASSLEKS 
MREAGNTGAN IDAAKAVGKL LAERAVKQGV KEVVFDRGGY LYHGRVKALA DAARESGLSF