Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2311 |
Symbol | rplR |
ID | 3908942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2661855 |
End bp | 2662217 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884208 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_485927 |
Protein GI | 86749431 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0992173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.451377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAGT TGAATGTCAC GAATGCCCGG CGCAAGACTC GGGTCCGGAT CGCGCTGCGG CGCACCGCCA ACGGCCGTCC GCGGCTGTCG GTGTTCCGCT CGTCGAAGCA TATTTACGCC CAGGTGATCG ACGATCTGAA GGGCGAGACC CTGGCCTCGG CGTCGTCGCT GGAGAAGTCG ATGCGCGAAG CCGGCAACAC CGGCGCCAAC ATCGACGCGG CGAAGGCGGT CGGCAAGCTG CTGGCGGAGC GCGCGGTGAA GCAGGGCGTC AAGGAAGTCG TGTTCGACCG CGGCGGCTAT CTGTATCACG GCCGCGTCAA GGCGCTGGCG GATGCGGCGC GCGAGAGCGG CCTGAGCTTC TAA
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Protein sequence | MSKLNVTNAR RKTRVRIALR RTANGRPRLS VFRSSKHIYA QVIDDLKGET LASASSLEKS MREAGNTGAN IDAAKAVGKL LAERAVKQGV KEVVFDRGGY LYHGRVKALA DAARESGLSF
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