Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1515 |
Symbol | greA |
ID | 3908428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1707157 |
End bp | 1707681 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883410 |
Product | transcription elongation factor GreA |
Protein accession | YP_485136 |
Protein GI | 86748640 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.796858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAC CAAGGCGCCC GCGACGAATG CTGAAGGATA AAGGCAAGAT GGTGGAAAAG GTACCGATGA CGGCGGGCGG CTACGCCGCG CTTTCGGACG AATTGAAGAA GCGCCAGTCG GTGGATCGTC CGCGCATCAT CGAGCATATC GCCGAGGCGC GCTCGCATGG CGACCTGTCC GAAAACGCGG AGTATCACGC CGCCAAGGAA GAGCAGTCGC ACAACGAGGG CCGCATCGCC GAGCTCGAGG ACAAGCTGGC GCGCGCCGAC ATCATCGACA TCAGCAAGCT CAGCGGCGAC ACCATCAAGT TCGGCGCCAC CGTGACGCTG ATCGACGAGG ACACCGAGAA GAAGGCGGTG TGGCAGATCG TCGGCGAAAA CGAAGCGGAC GCCAAGAAGG GCAAGATCTC GATCACCTCG CCGCTTGCCC GCGCGCTGAT CGGCAAGACC AAGGGCACCT CGGTCGAGGT CGTCGCCCCC GGCGGCGCCA AGGCCTACGA GATCGCCAAG GTCGAGTGGC GCTGA
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Protein sequence | MRRPRRPRRM LKDKGKMVEK VPMTAGGYAA LSDELKKRQS VDRPRIIEHI AEARSHGDLS ENAEYHAAKE EQSHNEGRIA ELEDKLARAD IIDISKLSGD TIKFGATVTL IDEDTEKKAV WQIVGENEAD AKKGKISITS PLARALIGKT KGTSVEVVAP GGAKAYEIAK VEWR
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