Gene RPB_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1515 
SymbolgreA 
ID3908428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1707157 
End bp1707681 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID637883410 
Producttranscription elongation factor GreA 
Protein accessionYP_485136 
Protein GI86748640 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.796858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAC CAAGGCGCCC GCGACGAATG CTGAAGGATA AAGGCAAGAT GGTGGAAAAG 
GTACCGATGA CGGCGGGCGG CTACGCCGCG CTTTCGGACG AATTGAAGAA GCGCCAGTCG
GTGGATCGTC CGCGCATCAT CGAGCATATC GCCGAGGCGC GCTCGCATGG CGACCTGTCC
GAAAACGCGG AGTATCACGC CGCCAAGGAA GAGCAGTCGC ACAACGAGGG CCGCATCGCC
GAGCTCGAGG ACAAGCTGGC GCGCGCCGAC ATCATCGACA TCAGCAAGCT CAGCGGCGAC
ACCATCAAGT TCGGCGCCAC CGTGACGCTG ATCGACGAGG ACACCGAGAA GAAGGCGGTG
TGGCAGATCG TCGGCGAAAA CGAAGCGGAC GCCAAGAAGG GCAAGATCTC GATCACCTCG
CCGCTTGCCC GCGCGCTGAT CGGCAAGACC AAGGGCACCT CGGTCGAGGT CGTCGCCCCC
GGCGGCGCCA AGGCCTACGA GATCGCCAAG GTCGAGTGGC GCTGA
 
Protein sequence
MRRPRRPRRM LKDKGKMVEK VPMTAGGYAA LSDELKKRQS VDRPRIIEHI AEARSHGDLS 
ENAEYHAAKE EQSHNEGRIA ELEDKLARAD IIDISKLSGD TIKFGATVTL IDEDTEKKAV
WQIVGENEAD AKKGKISITS PLARALIGKT KGTSVEVVAP GGAKAYEIAK VEWR