Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0274 |
Symbol | |
ID | 3907902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 308513 |
End bp | 309916 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882157 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_483896 |
Protein GI | 86747400 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.499041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.530597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACT ACGATCTCGT CATCATCGGC ACCGGCCCCG GCGGCTATGT CTGTGCGATC CGCGCGGCGC AGCTCGGCCT CAAGGTCGCG GTGGTCGAAA AGAACCCCAC GCTCGGCGGC ACCTGCCTCA ATGTCGGCTG CATGCCGTCG AAGGCGCTGT TGCACGCCTC GGAGCTGTTT GAGGAGGCCG GGCACTCCTT CGCCAAGATG GGGATCGGCG TGCCGGCGCC GACGCTCGAT CTGCCGACGA TGATGAATTT CAAGCAGCAG GGCATCGACG GCAACGTCAA GGGCGTCGAG TACCTGATGA AGAAGAACAA GATCGACGTG CTGGTCGGCC GCGGCAAGGT GCTCGGCACC GGCAAGGTCG AGGTCACCGG CAATGACGGC AAGGCGCAAA CCGTCGAGAC CAAGTCGATC GTGATCGCCA CCGGCTCGGA CGTGGCGAAG CTCAAGGGCA TCGAGATCGA CGAGAAGCGC ATCGTGTCGT CGACCGGCGC GCTGTCGCTC GACAAGGTGC CGGGCAAGCT GATCGTGGTC GGCGCCGGCG TGATCGGGCT CGAACTCGGC TCGGTGTGGC GCCGGCTCGG CGCCCAGGTC ACCGTGGTCG AATTTCTCGA CCGCATCCTG CCCGGCATGG ATGCCGAGAT CGTCAAGCAG TTCCAGCGCA TCCTCGAGAA GCAGGGTTTT GCCTTCAAGC TCGGCGCCAA GGTCACCGGG GTCGACAGTT CGGGCAAGCA GCTCAAGGTC AGCGTCGAGG CCGCGGCCGG CGGCAATCCG GAGACGCTCG AAGCCGACGT CGTGCTGGTC GCGATCGGCC GCGTGCCCTT CACCGAGGGG CTCGGGCTGC AGGAAGCCGG CGTCGCGCTC GACGAGCGCG GCCGCGTGGC GATCGACGAT CACTTCGCCA CAAGCGTCCA GGGCGTCTAT GCGATCGGCG ACGTGGTGAA GGGCCCGATG CTGGCGCACA AGGCCGAGGA CGAGGGCGTC GCGGTCGCGG AAATCATCGC CGGCAAGGCC GGGCACGTGA ACTACGACGT CATTCCGGGC GTGGTCTACA CCACGCCGGA AGTCTCATCC GTCGGCAAGA CCGAGGAAGA CCTCAAGCAG GCCGGCGTCG CCTACACGGT CGGCAAATTC CCGTTCACCG CCAACGGCCG CTCCAAGGTC AATCAGACCA CCGACGGTCT GGTGAAGATC CTGGCCGACG CCAAGACCGA CCGCGTGCTC GGCGTGCACA TCGTCGGCCG CGAAGCCGGC GAGATGATCC ACGAGGCCGC AGTGCTGATG GAGTTCGGCG GCTCGGCCGA GGATCTGGCA CGGACCTGCC ACGCTCACCC CACCCGCTCC GAAGCGGTCA AGGAAGCCGC GCTTGCGGTC GGAAAACGCG CCATCCATAT GTAA
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Protein sequence | MANYDLVIIG TGPGGYVCAI RAAQLGLKVA VVEKNPTLGG TCLNVGCMPS KALLHASELF EEAGHSFAKM GIGVPAPTLD LPTMMNFKQQ GIDGNVKGVE YLMKKNKIDV LVGRGKVLGT GKVEVTGNDG KAQTVETKSI VIATGSDVAK LKGIEIDEKR IVSSTGALSL DKVPGKLIVV GAGVIGLELG SVWRRLGAQV TVVEFLDRIL PGMDAEIVKQ FQRILEKQGF AFKLGAKVTG VDSSGKQLKV SVEAAAGGNP ETLEADVVLV AIGRVPFTEG LGLQEAGVAL DERGRVAIDD HFATSVQGVY AIGDVVKGPM LAHKAEDEGV AVAEIIAGKA GHVNYDVIPG VVYTTPEVSS VGKTEEDLKQ AGVAYTVGKF PFTANGRSKV NQTTDGLVKI LADAKTDRVL GVHIVGREAG EMIHEAAVLM EFGGSAEDLA RTCHAHPTRS EAVKEAALAV GKRAIHM
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