| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0083 |
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| Symbol | |
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| ID | 3908725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 86769 |
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| End bp | 88157 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881964 |
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| Product | major facilitator transporter |
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| Protein accession | YP_483706 |
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| Protein GI | 86747210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.339646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.26187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAT CGACCGCGGC GGACCACTCG CGAGAGAGTG TGCCGAGAAC CTATCCGTCG
CGCGCCGCGG TCGGCGGCTG GATCCTGTTC GACTGGGCGG CGCAGCCCTA TTTCACGCTG
ATCACCACCT TCATCTTTGC GCCCTATTTC GCCACTTACG TCGCGCCCGA TCCCGCCACC
GGGCAATCGC TGTGGGGCTT CGCGACGGCG GCGAGCGGGC TGTTGATTGC TTTGGCCTCG
CCGATCCTCG GCGCGGTCGC CGATGCGAGC GGCCGGCGCA AGCCGTGGAT CGCGGTGTTC
GGCGCGATGC TGGTGATCGG CTCGTCACTG ATGTGGTTCG GCCGGCCGGG CGATGCCGGC
GTGATCCTGC CGCTGCTGAT CGCCTACGCG ATCGCGACCA TCGGGGTCGA ATTCGCCACC
GTGTTCAACA ACGCGATGAT GCCGAACCTG GTGCCGCCGG AGAAAATCGG CCGGCTGTCC
GGCACCGGCT GGGCCACCGG CTATGTCGGC GGCATTCTCT CGCTGATTCT CGTGCTCGGC
TTCCTCGCCG CCAACCCGCA GACCGGCAAG ACGCTGATCG GCGTCACGCC GCTGTTCGGG
CTCGACGCGG CGAGCCACGA GGGCGACCGC ATCACCGGCC CGCTCACCGG GCTGTGGTTT
ATGGTGTTCG TGCTGCCGAT GTTTCTGCTG ACGCCGGATT TTCCGGCCAA GCTGTCGGTG
AAGGCGGCGG TCGGCGAGGG CCTGCGCGAA TTGCGCGAGA CGCTGCGCGA CCTGCCGCAG
CGGCGCTCGC TCGCCTCCTT CCTGCTCGCC AACATGATCT ACACCGACGG GCTCGTCTCG
CTGTTCGCCT TCGGCGGCAT CTACGCCACC GGCACGTTCG GCTGGGGCAC CATCCAGATC
GGCAGCTTCG GCGTGATTCT GGCGATCGCC GCGACCTTCG GGGCGTTCAT CGGCGGCCGG
CTTGACGACG CGCTCGGATC GAAGCGCGTG ATCGCCGGAT CGATCGTGCT GCTGCTGATC
GCGATCAGCG GCATCCTGCT GATCGATCCG TCGCATATCC TGTTCGTCGA GGTGACGCCG
CCGCAGCCGG GCGGCGCTCT GTTCGCCGCC CCCGCCGAGC GCGCTTATCT GCTGCTCGGC
TGCCTGATCG GCATCGCCGG CGGGCCGCTG CAGGCGGCGT CGCGGACGCT GCTGATCCGC
ATCGCCCCGC GCGACCGCAT CGCGCAATAT TTCGGCCTGT TCGCGCTGAC CGGCAAGGTC
ACGTCGTTCG TCGGCCCGCT GCTGATCGCC ACCGTCACCG CCATCACCGC GAGCCAGAAG
GCCGGCATGG CGGTGCTGGT GCTGTTCTTC GTCGGCGGCC TGGCGCTGCT GACGCGGGTG
CGGAATTAG
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| Protein sequence | MTSSTAADHS RESVPRTYPS RAAVGGWILF DWAAQPYFTL ITTFIFAPYF ATYVAPDPAT
GQSLWGFATA ASGLLIALAS PILGAVADAS GRRKPWIAVF GAMLVIGSSL MWFGRPGDAG
VILPLLIAYA IATIGVEFAT VFNNAMMPNL VPPEKIGRLS GTGWATGYVG GILSLILVLG
FLAANPQTGK TLIGVTPLFG LDAASHEGDR ITGPLTGLWF MVFVLPMFLL TPDFPAKLSV
KAAVGEGLRE LRETLRDLPQ RRSLASFLLA NMIYTDGLVS LFAFGGIYAT GTFGWGTIQI
GSFGVILAIA ATFGAFIGGR LDDALGSKRV IAGSIVLLLI AISGILLIDP SHILFVEVTP
PQPGGALFAA PAERAYLLLG CLIGIAGGPL QAASRTLLIR IAPRDRIAQY FGLFALTGKV
TSFVGPLLIA TVTAITASQK AGMAVLVLFF VGGLALLTRV RN
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