Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0078 |
Symbol | |
ID | 3908720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 81424 |
End bp | 81900 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637881959 |
Product | hypothetical protein |
Protein accession | YP_483701 |
Protein GI | 86747205 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0745922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTACA TCGACCAGAT CCTGCAGCCC GGGGAGAAGG TGCTCTATTC GGCCAAGCCG CACTGGATCT TCTATCTGCC GGCGCTCGGG CTGTGGATCA TCGTTGCCGC GGTCGCCGGC CTGACCCGCA TTCCCGCCGT CGTCGCCATG GACCCGCGCA TCGAGATCGG TATGCTGGGA CTGGCTGCAG TGATCGGGGT GTTCGCGCTG TATTTGACGC TGAAGGCCTG GTTCCATCGC TGGACCACCG AGACGGACGT CACGTCGCTG CGGCTGGTCC ATAAAACCGG ATTCATTCAG CGCCGTACCT TCGAGATGAG CCTGGACAAG ATCGAGAGCG TTGACCTCGA TCAGAGCATC CTCGGCCGCG TTCTCGACTA TGGCGACGTC ACCGTTCTGG GCGTCGGCGA GGGGCGGGAA ACCATCCGGA CCGTCGCCGC CCCGCTGGCG TTCCGAAGTT CAATAACCGC GCGATAG
|
Protein sequence | MGYIDQILQP GEKVLYSAKP HWIFYLPALG LWIIVAAVAG LTRIPAVVAM DPRIEIGMLG LAAVIGVFAL YLTLKAWFHR WTTETDVTSL RLVHKTGFIQ RRTFEMSLDK IESVDLDQSI LGRVLDYGDV TVLGVGEGRE TIRTVAAPLA FRSSITAR
|
| |