Gene RPB_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0078 
Symbol 
ID3908720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp81424 
End bp81900 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID637881959 
Producthypothetical protein 
Protein accessionYP_483701 
Protein GI86747205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0745922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTACA TCGACCAGAT CCTGCAGCCC GGGGAGAAGG TGCTCTATTC GGCCAAGCCG 
CACTGGATCT TCTATCTGCC GGCGCTCGGG CTGTGGATCA TCGTTGCCGC GGTCGCCGGC
CTGACCCGCA TTCCCGCCGT CGTCGCCATG GACCCGCGCA TCGAGATCGG TATGCTGGGA
CTGGCTGCAG TGATCGGGGT GTTCGCGCTG TATTTGACGC TGAAGGCCTG GTTCCATCGC
TGGACCACCG AGACGGACGT CACGTCGCTG CGGCTGGTCC ATAAAACCGG ATTCATTCAG
CGCCGTACCT TCGAGATGAG CCTGGACAAG ATCGAGAGCG TTGACCTCGA TCAGAGCATC
CTCGGCCGCG TTCTCGACTA TGGCGACGTC ACCGTTCTGG GCGTCGGCGA GGGGCGGGAA
ACCATCCGGA CCGTCGCCGC CCCGCTGGCG TTCCGAAGTT CAATAACCGC GCGATAG
 
Protein sequence
MGYIDQILQP GEKVLYSAKP HWIFYLPALG LWIIVAAVAG LTRIPAVVAM DPRIEIGMLG 
LAAVIGVFAL YLTLKAWFHR WTTETDVTSL RLVHKTGFIQ RRTFEMSLDK IESVDLDQSI
LGRVLDYGDV TVLGVGEGRE TIRTVAAPLA FRSSITAR