| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0075 |
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| Symbol | prfA |
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| ID | 3907815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 76273 |
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| End bp | 77358 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637881956 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_483698 |
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| Protein GI | 162138527 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.439429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.176298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC TGCCCGAAGC CAAGCTCGAC GTTCTGCTCG CGCATCATGC CTCGCTCGAA
GCGCAATTGC TCGGCGAGGT CGCGGCCAAT GATTACGTCC GCATCACTCG CGAATTGTCC
GAGTTGAATC CGCTGGTCGA GGCGGTGAAG GCCTATCGCG AAGTCCGCGA CGAACTCGGC
GACATCGACG ATCTGCTCGA AGATCCCGCG ACCGATCCGG AGATGCGGGC GATGGCGGAG
GCCGAGCGCG ACGCGCTCGA TGCCCATCGC GAGGACCTGA TCCAGCAGAT CCGGGTCGCG
CTGCTGCCGA AGGACGCGAT GGACGAGCGC AACGTGATGC TCGAAATCCG CGCCGGCACC
GGCGGCGACG AGGCCTCGCT GTTCGCCGGC GACCTGTTCC GGATGTACGA GAAATTCGCG
GCCTTGCAGG GCTGGAGCGT CGAGGTGATC TCGGCCAGCG AGGGCACCGT CGGCGGCTTC
AAGGAGATCA TCGCCGAGGT GAAGGGGCGT GGCGCCTTCG CCAAGCTGAA ATTCGAATCC
GGCGTGCATC GGGTGCAGCG CGTGCCCGAC ACCGAGACGC AGGGGCGCAT CCACACCTCG
GCGGCGACCG TGGCGGTGCT GCCCGAGGTC GAGGAGGTCG ACGTCGACAT CAAGCCGGAT
GATCTCAAGA TCGACACGAT GCGGGCACAG GGCGCCGGCG GCCAGCACGT CAACAAGACC
GAATCGGCGA TCCGCATCAC TCATCTGCCG ACCGGCATCG TGGTGATGAT GCAGGACAGC
CGCTCGCAGC ACAAAAACCG CGCCTCGGCG ATGAACATCC TGCGTTCGCG AATCTACGAC
GCCGAGCAGC AGCGGATCGA TTCGGCGCGC TCGGCCGAGC GCAAGCAGAA GGTCGGCTCC
GGCGACCGCT CGGAGCGGAT CCGCACCTAC AACTTCCCGC AGGGCCGCGT CACCGATCAC
CGCATCAATC TGACGCTGTA CAAGCTGCCG CAGGTGATCG CCGGCGAAGC GCTCGGCGAG
CTGATCGACG CGCTGACCAC CGAACACCAG GTGGCCCAGC TCGCGGCGCA GGGCCATGCG
GCCTGA
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| Protein sequence | MSNLPEAKLD VLLAHHASLE AQLLGEVAAN DYVRITRELS ELNPLVEAVK AYREVRDELG
DIDDLLEDPA TDPEMRAMAE AERDALDAHR EDLIQQIRVA LLPKDAMDER NVMLEIRAGT
GGDEASLFAG DLFRMYEKFA ALQGWSVEVI SASEGTVGGF KEIIAEVKGR GAFAKLKFES
GVHRVQRVPD TETQGRIHTS AATVAVLPEV EEVDVDIKPD DLKIDTMRAQ GAGGQHVNKT
ESAIRITHLP TGIVVMMQDS RSQHKNRASA MNILRSRIYD AEQQRIDSAR SAERKQKVGS
GDRSERIRTY NFPQGRVTDH RINLTLYKLP QVIAGEALGE LIDALTTEHQ VAQLAAQGHA
A
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