Gene RPB_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0073 
Symbol 
ID3907813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp74942 
End bp75721 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content49% 
IMG OID637881954 
Producthypothetical protein 
Protein accessionYP_483696 
Protein GI86747200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.203643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.4338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACA ACGCAACGGG CCGAATTGAC GAACTTAATC AGATCGTCCG AGAAAACGAA 
ATATTCTGCA TCCTCACTAG GGATAGCTCC CTACAGGAAG AGGCTTGCTC TGCACTCTCG
GGTGCTTTGG AGAAATGCAG CTCCTTAAAG GCAGATTCGA TCGACTCTCA GAACGAAGTT
CTGGCGAACC TCGCCCTCGG TTTTGAATGT GTTTTGCGCA TGCTTATCTC CGAGTTGAAG
ATGTGGATTC TGCTCAAACA GGAAGAGCCC GATAAGGCTT GGGACTATTT GATCGAAGCG
CAGATGGCTG CATCAGATGC AGCCCGAGCG CATAAAGGGT TCACTCATGT AAGAGAGAGA
GGCAAGCAAC TTGAAGATTT GGAGAGAACG ATTTTCCCGC CTCAAGTTTT CTTTAGTGCG
GGCCTGATTG TAAGGAAGCA GATCTGTACT GTTTGCGGAA GCGAGTACGG TACATGCGGG
CACATAGTTG GGAGGCCTTA TTGGGGCGAA TTTTGCTGTA TTCGAGTTGA GGATTTTGAA
GCTAACCACT TTTCTATGGT GGAGGACCCC GCCGACAAGC GTTGTCGCGT CATTACCTTT
GAAGATGGAC TCGGCGAACG AAATCGCATG ACTTGGAAGG TCGTGCCACC CTCTGAAAAG
AGCTTTGAAA AATCCAGCCA GCTTAACTAT CAGGTGAATG GCTCGAATAA TTTATCTGCG
CCACTTAGAA GTTCGGCAAG GCTCATGCAT ATTGATACCT TGGCACGGCG TCGAAGTTGA
 
Protein sequence
MVDNATGRID ELNQIVRENE IFCILTRDSS LQEEACSALS GALEKCSSLK ADSIDSQNEV 
LANLALGFEC VLRMLISELK MWILLKQEEP DKAWDYLIEA QMAASDAARA HKGFTHVRER
GKQLEDLERT IFPPQVFFSA GLIVRKQICT VCGSEYGTCG HIVGRPYWGE FCCIRVEDFE
ANHFSMVEDP ADKRCRVITF EDGLGERNRM TWKVVPPSEK SFEKSSQLNY QVNGSNNLSA
PLRSSARLMH IDTLARRRS