| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0069 |
|---|
| Symbol | |
|---|
| ID | 3907809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 71018 |
|---|
| End bp | 71785 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637881950 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_483692 |
|---|
| Protein GI | 86747196 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG ACATCCGCAT CGTTCCGTGC CTCACCGACA ATTTCGGCTA TCTGATCCAC
GACCCGTCGA GCGGCGCCAC GGCCTCGATC GACGCGCCCG AGGCCGCGCC GCTGATCGCG
GCGCTCGAGA AGGAAGGCTG GAAGCTCACG GATATCCTGG TGACACATCA TCACGGCGAT
CACGTCGGCG GCATCGCCGA ACTGAAGGCG AAGTATCACT GCCGCGTCGT TGCGCCGCAC
GACGCCAACG CCAAGATCGC CGACGCCGAT CTGCGGGTCG AGGAGGGCGA TGTCGTCAAG
GTCGGCGGGC TCGAAGCGCG GGTGCTGGAA ACCCCCGGCC ATACGCTCGA CCACATCTCC
TACGTGTTCG CCGACGACCG CGCGCTGTTC GCCGCCGATA CGCTGTTCTC GATCGGTTGC
GGCCGGGTGT TCGAGGGCAC CTATCCGATG ATGTGGGAAT CGCTGCTGAA GCTGCGGGCG
CTGCCCGACG ACTACAAGCT TTATTGCGGC CACGAATACA CCGCCTCGAA CGTCAAATTC
GCGCTGACGA TCGAGCCCGA GAACGCCGCC CTGCAGGCGC GCGCCAAACA GGTCGAGCAG
CAGCGCGGCG CCGGCCGGCC GACCATCCCG GTGACGCTCG GCGAGGAGAA ACAGGCCAAT
GTGTTCCTGC GCGCCGACGT GCCGTCGGTC GCAGCGGCCA TTGGTTTCGC CGGCGAGAGC
GCGGCGGACG TGTTCGGTGA ACTCCGCGAG CGCAAGAACA ACTCGTGA
|
|---|
| Protein sequence | MAADIRIVPC LTDNFGYLIH DPSSGATASI DAPEAAPLIA ALEKEGWKLT DILVTHHHGD
HVGGIAELKA KYHCRVVAPH DANAKIADAD LRVEEGDVVK VGGLEARVLE TPGHTLDHIS
YVFADDRALF AADTLFSIGC GRVFEGTYPM MWESLLKLRA LPDDYKLYCG HEYTASNVKF
ALTIEPENAA LQARAKQVEQ QRGAGRPTIP VTLGEEKQAN VFLRADVPSV AAAIGFAGES
AADVFGELRE RKNNS
|
|---|
| |