| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0051 |
|---|
| Symbol | mepA |
|---|
| ID | 3908137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 54035 |
|---|
| End bp | 54991 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637881932 |
|---|
| Product | penicillin-insensitive murein endopeptidase |
|---|
| Protein accession | YP_483674 |
|---|
| Protein GI | 86747178 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3770] Murein endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCC GATCGATTCC CGCCAGATGG CTGTTGGCCG CCGCGCTGCT CGGCGCCTCG
GTGCCGTCTG CGTGGGCGCA GGACAAGGGC ACGGTCGATC CGAAGCCGCT GCCGCCGCTC
GCCAACCCCA ACGATCCCGA ACTCGCCGCG CGCGAACTGT TCGGCCGCCG GTATCTGCCC
GCCGCGCTGC CGCCGCGGCC GATCGGGTTC TACGCCCGCG GCTGCCTTGC CGGCGCCGAG
GCGCTGCCGA TCACCGGCAA GACCTGGCAG GTGATGCGGC TGTCGCGCAA TCGGTTCTAC
GCCTATCCGG CGATGGTCGA TCTGGTGGCG CGGCTGTCGC GGAAGGCGCA CAGCGACGCC
GGCTGGCCGG GCATTCTGGT CGGCGACATG TCGCAGCCGC GCGGCGGGCC GATGCTGACC
GGCCACGCCA GCCATCAGGT CGGGCTCGAC GCCGACATCT GGCTGACGCC GATGCCGAAC
CGGCAGCTGT CGCGCAACGA GCGCGAGGAG ATGTCGGCGG TGATGATGGT GCGCCGCGAC
CGGCTCGACA TCGATCCCGC GGCCTGGACG CCGACGCATT GGAAAGTGAT CCGCGCCGCC
GCGCAGGAGC CTCAAGTCGA GCGCATCTTC GCCAACGCCG CGATCAAGAA GGCGCTGTGC
CGCGAGGCCA AGGGCGACCG CGGCTGGCTC AACAAGGTGC GGCCGATGTA CGGCCATGAT
TACCACTTCC ACATCCGCAT CAAATGCCCG CCCGGTCTCG CCGGCTGCGA GGCGCAACCC
GAAACTCCGC AAGGCGAGGG CTGCGCGCCC GCCGACCTCG CCTACTGGTT CTCCGACGCG
GTGCTGCATC CCAAGCCGCC GAAAGTGCCG CCGAAGCCGA AGCGCCAGCT CACCCTCGCC
GAACTGCCGG CGGAATGCCG CGCCGTGCTG AACGCGCCCG ACAAGAAGAT CGACTAG
|
|---|
| Protein sequence | MRRRSIPARW LLAAALLGAS VPSAWAQDKG TVDPKPLPPL ANPNDPELAA RELFGRRYLP
AALPPRPIGF YARGCLAGAE ALPITGKTWQ VMRLSRNRFY AYPAMVDLVA RLSRKAHSDA
GWPGILVGDM SQPRGGPMLT GHASHQVGLD ADIWLTPMPN RQLSRNEREE MSAVMMVRRD
RLDIDPAAWT PTHWKVIRAA AQEPQVERIF ANAAIKKALC REAKGDRGWL NKVRPMYGHD
YHFHIRIKCP PGLAGCEAQP ETPQGEGCAP ADLAYWFSDA VLHPKPPKVP PKPKRQLTLA
ELPAECRAVL NAPDKKID
|
|---|
| |