Gene RPB_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0045 
SymbolpheS 
ID3908131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp44142 
End bp45266 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content65% 
IMG OID637881926 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_483668 
Protein GI86747172 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG AGAGGCCGGT TCTGCATCCG AGAAGGATCG CCATGACCGA CCTTTCGACT 
CTGCAATCTC AAATCCTCTC CGACATCGCC GCGGCCTCCG ACGAGGCCGC GCTGGAAGCG
GTGCGCGTCG CCGCGCTCGG CAAGAAGGGC TCCGTCTCGG CGCTGCTCGC CACGCTCGGC
AAGATGGACC CCGAGCAGCG CAAGACCGAG GGCGCGGCGA TCAATCTCGC CAAGGATGCG
GTGACGCAGG CGCTGGCCGC GCGGCGCGAC GTGCTGAAGG CCGCCGCGCT CGACGCCAAG
CTCGCCGCCG AGACCATCGA CGTCACCCTG CCGCTGCGTG AACCGCTCGC CGAAGCCGGC
CGGATTCATC CGCTCAGCCA GGTCTGGGAC GAACTCACCG CGATCTTCGC CGACATGGGT
TTCGCCATCG CCGAAGGTCC GGACATCGAG ACCGACGACT ACAACTTCAC CAAGCTGAAC
TTCCCCGAGG GCCATCCGGC CCGCGAGATG CACGACACCT TCTACTTCAA CCCGAAGGAC
GACGGCTCGC GCCTGCTGCT GCGCACCCAC ACCTCGCCGG TGCAGGTCCG CACCATGCTG
AGCCAGAAGC CGCCGATCCG CGTGATCTGT CCGGGCCGCA CCTATCGCAG CGACTCTGAC
CAGACCCACA CGCCGATGTT CCATCAGGTC GAGGGTCTCG TCATCGACAA GGGCAGCCAC
CTCGGTCATC TGAAGTGGAT CCTGCACGAA TTCTGCAAGG CGTTCTTCGA GGTCGACAAC
GTCAATATGC GGTTCCGGCC GTCGTTCTTC CCGTTCACCG AGCCGTCGCT GGAAGTCGAC
ATCCAGTGCC GCCGCGGCAA GGACGAGATC CGCTTCGGCG AGGGCGAGGA CTGGCTGGAG
ATTCTCGGCT GCGGCATGGT GCACCCCAAC GTGCTCACCG CCTGCGGCCT CGATCCCGAC
GTCTATCAGG GCTTCGCCTG GGGCATGGGC ATCGACCGCA TCGCGATGCT GAAATACGGC
ATGAGCGATC TGCGGCAATT GTTCGAAGCC GATTCGCGCT GGCTGAATCA TTACGGCTTC
AAGCCGCTGG ATATCCCGAC GCTGGCGGGC GGATTGAGTT CGTGA
 
Protein sequence
MTDERPVLHP RRIAMTDLST LQSQILSDIA AASDEAALEA VRVAALGKKG SVSALLATLG 
KMDPEQRKTE GAAINLAKDA VTQALAARRD VLKAAALDAK LAAETIDVTL PLREPLAEAG
RIHPLSQVWD ELTAIFADMG FAIAEGPDIE TDDYNFTKLN FPEGHPAREM HDTFYFNPKD
DGSRLLLRTH TSPVQVRTML SQKPPIRVIC PGRTYRSDSD QTHTPMFHQV EGLVIDKGSH
LGHLKWILHE FCKAFFEVDN VNMRFRPSFF PFTEPSLEVD IQCRRGKDEI RFGEGEDWLE
ILGCGMVHPN VLTACGLDPD VYQGFAWGMG IDRIAMLKYG MSDLRQLFEA DSRWLNHYGF
KPLDIPTLAG GLSS