Gene RPB_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0018 
Symbol 
ID3910223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp18787 
End bp19707 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID637881899 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_483641 
Protein GI86747145 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTC TGATTGTCGG CGCCGGTGCG ATCGGTGGCT ATTTCGGCGG CCGGCTGCTG 
CAGATCGGCC GCGACGTCAC CTTCCTGGTG CGCCCCAAGC GCGCCGACGA GCTGGCGCGT
GACGGGCTGG TGATCAAGAG TCCGCACGGC GACCTGACGA TTCCACATCC GCCGGTGGTC
CAGGCCGATG GCCTCGCGCC CGACTACGAT CTGGTGCTGC TGAGCTGCAA GGCGTTCGAC
CTCGACGACG CCATCGCCTC GTTCGCCGCG GGGGTCGGGC CGCAGACCGT GGTGCTGCCG
CTGCTCAACG GAATGAAGCA TCTCGACGTG CTCGACGCAG CGTTCGGTCG CGCGCGGGTG
CTCGGCGGCC AATGCGTGAT CGCGGCGACG CTGGATGCGC AGCGCCATGT CGTGCAGCTC
GCGCCGATGA ATGCGATCAC CTTCGGCGAG CGTGACGGCG GCCTGTCGGA CCACGTCGGC
GCGATCGCGC GGACGCTGGG CGGCTCCTCC TTCGAGGTCA ACCCGAGCGC CGAGATCATG
CAGGAGATGT GGGAGAAGTG GGTGTTTCTC GCCTCGCTGG CCGGCTCCAC CAGCCTGATG
CGCGCGGCGG TCGGCGATAT TCTGGCGGCG CCCGGCGGCG CCGATTTCAT GCTCGGCGTG
GTCGACGAGA TCTCGGCGAT CGCAGCCGTC GCGGGCCATC CGCCGCGCGA AGCGTTCCTC
GAACGCGCCC GTGGCGCGCT GCTGGCGAAA GGCTCCGCGC TCACCGCCTC GATGTTTCGC
GACATCCAGG CCGGCGCCAG GATCGAGGCC GATCATGTGA TCGGTGACCT GATCGCGCGC
GGCGATGCGG CCAAACGCCC GGTCGCCCGG CTGCGGGTGA TCTACACCCA CCTCAAGGCC
TATGAGCGGC AGCGCGGCTG A
 
Protein sequence
MRILIVGAGA IGGYFGGRLL QIGRDVTFLV RPKRADELAR DGLVIKSPHG DLTIPHPPVV 
QADGLAPDYD LVLLSCKAFD LDDAIASFAA GVGPQTVVLP LLNGMKHLDV LDAAFGRARV
LGGQCVIAAT LDAQRHVVQL APMNAITFGE RDGGLSDHVG AIARTLGGSS FEVNPSAEIM
QEMWEKWVFL ASLAGSTSLM RAAVGDILAA PGGADFMLGV VDEISAIAAV AGHPPREAFL
ERARGALLAK GSALTASMFR DIQAGARIEA DHVIGDLIAR GDAAKRPVAR LRVIYTHLKA
YERQRG