Gene RPB_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0012 
Symbol 
ID3910217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp12887 
End bp13387 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID637881893 
ProductFixH 
Protein accessionYP_483635 
Protein GI86747139 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.747297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTC CAACCTCCAA ACCCAGGCAA CTCACCGGCA AGGTCGTGTT CGTGTCGCTG 
GTCGCCTTCT TCGGCGTGGT GTTCGGCGTC AACGGGCTGA TGATGGCGCT GGCGATCAAG
ACGCTGCCGG GTACCGAGGT CGACAGCGCC TATGCGGCGA GCCTCGCTTA CGAAAGCGAG
ATCGCCGCGG CGCGCGATCA GGAGAAACGC GGCTGGAAGG TCGACGCCCG GGTCGAACGC
CGGCCCGACG GCCGCGCGAC GCTGCGGGTC GAGGCGCGCG ACCGCGCCGG ACTGCCGCTG
TCGGGGCTGA CATTCTTCGG CCGCCTCGAG CGACCGGCCG ACAAGGCGGG GGACCACGAT
GTGGTGCTCG CCGAGACCGC GAGCGGCGTG TTTCAGGGCG ATGCCACGGG GGTCGCACCG
GGGCGCTGGG ATCTGGTGCT GGAGGGCGAT CAGAACGGCA ACCGCATGTT CTTGTCGAAG
AACCGCCTGA CGCTGAACTG A
 
Protein sequence
MTRPTSKPRQ LTGKVVFVSL VAFFGVVFGV NGLMMALAIK TLPGTEVDSA YAASLAYESE 
IAAARDQEKR GWKVDARVER RPDGRATLRV EARDRAGLPL SGLTFFGRLE RPADKAGDHD
VVLAETASGV FQGDATGVAP GRWDLVLEGD QNGNRMFLSK NRLTLN