Gene RPB_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0003 
Symbol 
ID3910208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3640 
End bp4011 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID637881884 
Producthypothetical protein 
Protein accessionYP_483626 
Protein GI86747130 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.747297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGC GCCCGCGTCA CGTTTCAACC CCAGCGAAAC TCCGTGCCTT TGCCAAGACG 
ATGCGGCACG CGCCCACTGA TGCGGAATCC GCGATGTGGA AGTTGCTGCG CGATCGCCGT
TTCGCCCAGC TGAAATTCCG CCGGCAGGTG CCGTTCCAGA ACTACATTCT CGACTTCGTC
TGCTTCGAGC AGCGCCTGGT GATCGAGATC GACGGCAGTC AGCATGCAGA GCAAACGCGC
GACCAGATTC GCGATGCCAC GCTCCTCGCT GCGGGCTTTC GCGTGCCGCG CTACTGGAAC
AACGACGTGC TGCAGCGTCG CACAGCGGTG CTTGAAGATA TCCTTGCGAA GCTTTCCGAA
ACGGACGAAT AA
 
Protein sequence
MPQRPRHVST PAKLRAFAKT MRHAPTDAES AMWKLLRDRR FAQLKFRRQV PFQNYILDFV 
CFEQRLVIEI DGSQHAEQTR DQIRDATLLA AGFRVPRYWN NDVLQRRTAV LEDILAKLSE
TDE