Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3856 |
Symbol | dinG |
ID | 3369391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4595497 |
End bp | 4597641 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654213 |
Product | ATP-dependent DNA helicase DinG |
Protein accession | YP_236924 |
Protein GI | 66047083 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.160495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.793215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTA CCGAACTCAA AACCCAGATC CAGGGCGCTT ACTCGCGTTT CCTCGAAGCC AAGAGCCTCA AGCCACGCTA TGGCCAGCGA TTGATGATCG CTGAAGTCGC CAAGGTGCTG GGGGACATTG ACACCGATGA AGAGGGCCGT CGTTCGGGCG ATCCTGCGGT AGTGGCCGTC GAGGCCGGGA CGGGTACCGG CAAGACCGTG GCTTACGCCA TCGCCTCGAT CCCCACCGCC AAGGCGGCAG GCAAGCGGCT GGTGATCGCC ACCGCGACCG TCGCCCTGCA GGAGCAGATC GTCTACAAGG ACCTGCCGGA CCTGATGCGC AACAGCGGTC TGAATTTTAC CTTCGCCCTG GCCAAGGGGC GCGGGCGTTA CATGTGCCTG TCCAAGCTCG ACGCATTGCT GCAGGAAAGT GACGCGACCA ACGCGACCGC GCAACTGTTC GAGGAAGAAG GCTTCAAGAT CGAAGTCGAT GAGGCCAGTC AGAAGCTTTT CACCAGCATG TTGCAGAAGC TGGCGGGCAA CAAGTGGGAC GGCGATCGCG ACAGCTGGCC GCAGGAACTC GCCGATCAGG ACTGGGCGCG TCTGACCACC GATCACAGCC AGTGCACCAA CCGGCACTGC CCCAACTTTC AGCAGTGCGC CTTCTATAAG GCGCGTGAAG GCATGGGCAA GGTCGATGTG ATCGTCACCA ACCACGACAT GGTGCTGGCC GACCTGGCAC TGGGCGGCGG TGCGGTGCTG CCGGACCCGC GTGACACCCT GTATGTCTTC GACGAGGGGC ATCACCTGCC GGACAAGGCC ATCGGCCACT TTGCCCACTA CACCCGATTG AAATCGACCG CCGACTGGCT GGAACAGACC GCCAAGAACC TCGCCAAGCT GCTGGCCCAG CATCCGCTGC CCGGCGATCT GGGCAAGCTG ATCGAGCAGG TGCCGGAGCT GGCCCGCGAG ATCAAGGGTC ATCAGCAGTT CATGTTCGGT GCCTGCGAGC AACTGGCGGA TTTCCGCGCC GGTGAGGACA TGCAGGGCCG CGAGCGTCCA CGTCACCGCT TTGTCGGCGG CGTGATTCCC GAGCACATTC GCGAGATGGG TATCGAGCTC AAGAAGGGCT TCGCGCGCCT CGACGACCTG TTCACGCGCC TGACCGAGCT GCTCAAGGAA GGCATGGACG GTGAGGTCAA CATCGGCATC GCCAGCCATC AGGCCGAAGA ATGGTATCCG CTGTTCGGCA GCCTGCTGGC TCGCGCGCAT GGCAACTGGG AATTGTGGAC AGCCTTCACC GCCGAAGACC CGGAAGACAG CCCGCCAATG GCGCGCTGGC TGACCTTGGC CGACAGCGGT GCAATGTTCG ATATCGAGGT CAATGCCAGC CCGATCCTGG CGGCGGAAAT GCTGCGTCGC AACTTGTGGA ACATCGCCTA CGGAGCGCTG GTCACCTCGG CGACCCTGAC CGCGCTGGGC AAGTTCGACC GCTATCGCAT GCGCGCCGGC CTGCCCAAGG GGGCGGTGAC CGCGGTGGTG CCAAGCCCGT TCCATCACGC TGATGCCGGC GTGCTGCGCG TACCCGACCT CAAGGCCGAC CCGCGTGACT CGGTGGCGCA TACCGCCGCG ATCATTCGCG ACCTGCCCGG TCTGGTGGAA GGTTCGCGGG GCACGCTGGT GCTGTATTCG TCGCGCAAGC AGATGCAGGA TGTGTTCGAC GGCCTGGACC GTGACTGGCG CAAGCAGGTG TTCATTCAGG GCAACCTGTC CAAACAGGAA ACCCTCAACA AGCACAAGGC ACGCGTCGAC AGCGGCGAGT CCAGCGTACT GTTCGGGCTG GCCAGCTTCG CCGAGGGTGT GGATTTGCCC GGTGCCTACT GCGAACATGT GGTCATCGCC AAGATCCCGT TCGCGGTGCC GGATGACCCG GTCGAGGCCG CGCTGGCCGA GTGGATCGAA GCGCGTGGCG GCAACCCGTT CATGGAGATC GCCGTGCCCG ATGCCTCGTT GCGTCTGGTG CAGGCCTGTG GCCGCTTGCT GCGCACCGAA GAGGACCGCG GCACCATCAC GCTGCTGGAC CGGCGGGTGG TCACCCAGCG CTATGGCAAG GCGATTCTCA ATGCGCTGCC ACCGTTCCGC CGGGAAATAA CGTGA
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Protein sequence | MISTELKTQI QGAYSRFLEA KSLKPRYGQR LMIAEVAKVL GDIDTDEEGR RSGDPAVVAV EAGTGTGKTV AYAIASIPTA KAAGKRLVIA TATVALQEQI VYKDLPDLMR NSGLNFTFAL AKGRGRYMCL SKLDALLQES DATNATAQLF EEEGFKIEVD EASQKLFTSM LQKLAGNKWD GDRDSWPQEL ADQDWARLTT DHSQCTNRHC PNFQQCAFYK AREGMGKVDV IVTNHDMVLA DLALGGGAVL PDPRDTLYVF DEGHHLPDKA IGHFAHYTRL KSTADWLEQT AKNLAKLLAQ HPLPGDLGKL IEQVPELARE IKGHQQFMFG ACEQLADFRA GEDMQGRERP RHRFVGGVIP EHIREMGIEL KKGFARLDDL FTRLTELLKE GMDGEVNIGI ASHQAEEWYP LFGSLLARAH GNWELWTAFT AEDPEDSPPM ARWLTLADSG AMFDIEVNAS PILAAEMLRR NLWNIAYGAL VTSATLTALG KFDRYRMRAG LPKGAVTAVV PSPFHHADAG VLRVPDLKAD PRDSVAHTAA IIRDLPGLVE GSRGTLVLYS SRKQMQDVFD GLDRDWRKQV FIQGNLSKQE TLNKHKARVD SGESSVLFGL ASFAEGVDLP GAYCEHVVIA KIPFAVPDDP VEAALAEWIE ARGGNPFMEI AVPDASLRLV QACGRLLRTE EDRGTITLLD RRVVTQRYGK AILNALPPFR REIT
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